Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_H17
(708 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 200 1e-52
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 90 2e-19
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 81 1e-16
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 79 5e-16
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 77 3e-15
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 75 1e-14
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 72 7e-14
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 70 4e-13
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 43 5e-05
SPBC36.08c |cog2||Golgi transport complex subunit Cog2 |Schizosa... 27 2.0
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 27 2.6
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 27 3.5
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 27 3.5
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 4.6
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 8.0
SPAC631.01c |acp2||F-actin capping protein beta subunit |Schizos... 25 8.0
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 25 8.0
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 25 8.0
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 200 bits (489), Expect = 1e-52
Identities = 103/178 (57%), Positives = 129/178 (72%), Gaps = 2/178 (1%)
Frame = -2
Query: 701 LGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAF 522
LGE+K+TF E K+P+S TILI GPN +T+ QI+DA RDGLRA+ NA+ED C+I GA AF
Sbjct: 354 LGEEKYTFVEDVKDPKSATILIHGPNTYTIQQIQDATRDGLRAVKNAVEDNCLIVGAGAF 413
Query: 521 EIKANTELL-KY-KDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRL 348
E+ L K+ VKGKA++G+ AYA+ALL+IPKTLA NS YD QD IV LQEE+
Sbjct: 414 EVACAAHLRNKFAAKEVKGKAKMGVYAYADALLIIPKTLAANSSYDTQDAIVALQEEAS- 472
Query: 347 NPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 174
+GLDL TG F P GI DNY V + +L+S +VIASNL+ VD+I+RAG SSLK
Sbjct: 473 EGYKVGLDLKTGMPFDPEVEGIYDNYRVIRHMLHSATVIASNLISVDQILRAGRSSLK 530
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 90.2 bits (214), Expect = 2e-19
Identities = 47/168 (27%), Positives = 88/168 (52%)
Frame = -2
Query: 701 LGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAF 522
LG++ +TF CKNP++ TIL++GP+K + +++ ++D + N + PG A
Sbjct: 353 LGDEYYTFLTGCKNPKACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGGAT 412
Query: 521 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 342
E+ + L + +++G A+ +A A+A+ +IP+TL N G + + +L+ +
Sbjct: 413 EMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKHAEGQ 472
Query: 341 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 198
G+D TG + G+ + VK Q + + A LL VD+I+
Sbjct: 473 HSFGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIV 520
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 81.4 bits (192), Expect = 1e-16
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Frame = -2
Query: 692 DKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEIK 513
DK E+C N ++VT+ ++G NK + + K A+ D L + N I D V+ G A EI
Sbjct: 371 DKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEIS 430
Query: 512 ANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ-EESRLNPEP 336
+ + K + + G + + A+A+AL IP LA NSG + + + ++ + N
Sbjct: 431 CSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAVKARHVKENKAY 490
Query: 335 IGLD-LSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAG 189
+G+D L TG ++D I KKQ L + + +L V++I+ AG
Sbjct: 491 LGIDCLQTGSNDMRKQF-VIDPLIGKKQQLLLATQLCRMVLKVNDIIVAG 539
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 79.4 bits (187), Expect = 5e-16
Identities = 41/169 (24%), Positives = 89/169 (52%)
Frame = -2
Query: 701 LGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAF 522
+G D+F E C ++ T++++G + +++ ++ D + + +A+++ V+ G A
Sbjct: 358 IGGDRFNLFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGAC 417
Query: 521 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 342
E++ + L Y T+ GK + I A+A +L VIP+ L N+G+D+ + + KL+ +
Sbjct: 418 EMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGE 477
Query: 341 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 195
G+D+ + + + + VK + S + A+ +L VDE ++
Sbjct: 478 MWAGVDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETIK 526
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 76.6 bits (180), Expect = 3e-15
Identities = 45/171 (26%), Positives = 86/171 (50%)
Frame = -2
Query: 704 VLGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAA 525
++GEDK + ++ TI+++G L + + A+ D L ++ + + V G
Sbjct: 349 IIGEDKMIKFSGVEAGEACTIVLRGATHQLLDESERAIHDALAVLSQTVAESRVTLGGGC 408
Query: 524 FEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLN 345
E+ + + GK + + A+A+AL +P LA N+G+D+ + + +L+
Sbjct: 409 AEMLMAKAVEEAATHEPGKKAVAVSAFAKALSQLPTILADNAGFDSSELVAQLKAAHYDG 468
Query: 344 PEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 192
+ +GLD+ GE GIL+ +K+ +++S S A LL VD I++A
Sbjct: 469 NDTMGLDMDEGEIADMRAKGILEALKLKQAVVSSGSEGAQLLLRVDTILKA 519
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 74.9 bits (176), Expect = 1e-14
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Frame = -2
Query: 701 LGEDKFTFXEQCKN-PQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAA 525
+G D+ T Q ++ ++ TI+++G K L ++ A+ DG+ + ++D +I GA A
Sbjct: 355 IGGDRVTVFRQVEDITRTATIVLRGATKTYLDDLERAIDDGVNIVKALVKDNRLIFGAGA 414
Query: 524 FEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKL-QEESRL 348
+++ L+ + G + I+ Y EA V+P+T++ N+G D D I KL +
Sbjct: 415 SDMQLCIRLISVGEKTPGIYQHAIKQYGEAFEVVPRTISENAGLDPTDVISKLYAAHHKE 474
Query: 347 NPEPIGLDL--STGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 198
N E IG+D+ + GI D + KK + + +L VD+++
Sbjct: 475 NGESIGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTVLNVDQVV 526
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 72.1 bits (169), Expect = 7e-14
Identities = 33/111 (29%), Positives = 65/111 (58%)
Frame = -2
Query: 695 EDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEI 516
+D+ + K S +I+++GPN+++L +++ ++ D L + +E V+PG A E
Sbjct: 363 DDECILVKGTKAYSSASIVLRGPNEYSLDEMERSMHDSLSVVKRTLESGKVVPGGGAVET 422
Query: 515 KANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ 363
+ L + ++ + +L I +A+ALL+IP+TLAVN+ D+ + KL+
Sbjct: 423 ALSIYLENFATSLGSREQLAIAEFAQALLIIPRTLAVNAAKDSTELTAKLR 473
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 69.7 bits (163), Expect = 4e-13
Identities = 39/155 (25%), Positives = 81/155 (52%)
Frame = -2
Query: 656 QSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEIKANTELLKYKDTV 477
++V+IL +G N TL + + ++ D L I ++ + +I G + EI+A LL++ +
Sbjct: 372 KTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQL 431
Query: 476 KGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPIGLDLSTGEAFKP 297
+G+ + I+A++EAL +IP TLA N+G +A + +L+ + G+++ G
Sbjct: 432 EGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKTAGINVRKGIVTNI 491
Query: 296 TDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 192
+ +L +V + + ++ +D+I A
Sbjct: 492 LEENVLQPLLVNISAIQLAAETTKMIMKIDDITLA 526
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 42.7 bits (96), Expect = 5e-05
Identities = 36/140 (25%), Positives = 66/140 (47%)
Frame = -2
Query: 644 ILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEIKANTELLKYKDTVKGKA 465
I + G ++ + + KD + D L A+ A+ + V+PGA +KA+ L T
Sbjct: 411 IKVGGSSEVEVNEKKDRIVDALNAVKAAVSEG-VLPGAGTSFVKASLRLGDIP-TNNFDQ 468
Query: 464 RLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEPIGLDLSTGEAFKPTDLG 285
+LG++ +A+ +T+ N+G + + KL+E IG D++ ++G
Sbjct: 469 KLGVEIVRKAITRPAQTILENAGLEGNLIVGKLKELYG-KEFNIGYDIAKDRFVDLNEIG 527
Query: 284 ILDNYIVKKQILNSCSVIAS 225
+LD V + L S +AS
Sbjct: 528 VLDPLKVVRTGLVDASGVAS 547
>SPBC36.08c |cog2||Golgi transport complex subunit Cog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 191
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -2
Query: 281 LDNYIVKKQILNSCSVIASNLLLVDEIMR 195
+ N + KQ + + +IASNLLL+D+I++
Sbjct: 118 IQNNLKHKQDVENEKLIASNLLLLDQILK 146
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 430 KRASA*AWIPRRALPLTVSLYFSSSVLALISKAAAP 537
KRA +W+ +LPL+V+LY VL +I K P
Sbjct: 227 KRAFQESWLSALSLPLSVNLY--KQVLNVIHKRVIP 260
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 683 TFXEQCKNPQSVTILIKGPNKH 618
++ E P S+T L K PNKH
Sbjct: 562 SYRESVSEPSSMTALSKSPNKH 583
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 26.6 bits (56), Expect = 3.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 683 TFXEQCKNPQSVTILIKGPNKH 618
++ E P S+T L K PNKH
Sbjct: 562 SYRESVSEPSSMTALSKSPNKH 583
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.2 bits (55), Expect = 4.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 591 NCIFDLCQGMLVGSLDEDGNRLWVLALFXKGKL 689
N ++D+ Q +L +D+D N + +F +GK+
Sbjct: 544 NVVYDVVQQVLNAPMDKDQNYALAVDMFKQGKI 576
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 703 YSEKTSLPLXNNARTHNLLPSSSRDPTSIP 614
Y TS+PL + HNL+ SR P+S P
Sbjct: 1714 YGLSTSVPLYTSLEKHNLI---SRSPSSPP 1740
>SPAC631.01c |acp2||F-actin capping protein beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 268
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -2
Query: 353 RLNPEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVD 207
RLNP+ I +L T + P +L + + + +N+CS + LL D
Sbjct: 13 RLNPKDISKNLDTILSVAPDLADVLLSSVDQPLKVNTCSESGNQYLLCD 61
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 25.4 bits (53), Expect = 8.0
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 706 TYSEKTSLP-LXNNARTHNLLPSSSRDPTSIP*HKSKMQFVTASALLITPLKINASYPVL 530
TY + ++ + ++ NLL SIP + S+ L + K +P L
Sbjct: 33 TYKHQDAIKKVMDDIHRSNLLRQELEKNLSIPKSATATTASAVSSELASYEKPKKEHPKL 92
Query: 529 RPSKSKLT 506
RPSK K T
Sbjct: 93 RPSKKKAT 100
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 127 QKLE*PQNKTFVYYYPLRLLIPALIISSTRRRLLAIT 237
Q E P N ++ YP ++ P ++T+ LLA T
Sbjct: 380 QTAEEPLNSYSLHVYPQKITAPTSPYAATQEELLAFT 416
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,720,460
Number of Sequences: 5004
Number of extensions: 53119
Number of successful extensions: 166
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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