Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_H17
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative odorant-b...    25   1.8  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   3.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.4  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    23   9.4  

>AJ618920-1|CAF01999.1|  204|Anopheles gambiae putative
           odorant-binding protein OBPjj4 protein.
          Length = 204

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -2

Query: 635 KGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEIKANTELLK-YKDTVK 474
           KGP  H    I + +  G+ A+ N   D      A    +KAN    K   DTVK
Sbjct: 72  KGPRGHPGECIAECIMKGMGALKNEKVDGPAFRKAIEPVVKANPAFAKLLDDTVK 126


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
 Frame = -2

Query: 656 QSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIP-------GAAAF-EIKANTE 501
           +S+  L+   + H +    D   + L AI++ +ED  V+P       G   F E+KA ++
Sbjct: 301 RSIATLMSNEHFHDIAYTADDREELLSAIDDFLEDSIVLPPSKWERQGLLPFEELKARSD 360

Query: 500 LLKYK 486
           +++ +
Sbjct: 361 MIRLR 365


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 321  EYR*SIQTYRLRYFGQ-LYREKTNIEFLFSDRKQPPPCRRDYESRNEQP 178
            +YR  ++T++     Q L R K     + S  + P P RR++   N+ P
Sbjct: 1546 QYR-DLETFQKAQLRQKLKRGKIEPNGVASSSQSPAPVRREFVMHNKAP 1593


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -2

Query: 479 VKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLN 345
           +KGKARLG   Y +    +  T   N+    +  + KL E  + N
Sbjct: 190 IKGKARLGTLVYRKTCTCVALTQFENAD---KPNLAKLVETIKTN 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,399
Number of Sequences: 2352
Number of extensions: 13194
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)