Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_H17
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 224 6e-59
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 89 2e-18
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 86 2e-17
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 86 2e-17
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 86 2e-17
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 80 2e-15
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 79 4e-15
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 75 4e-14
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 75 5e-14
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 73 2e-13
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 70 1e-12
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 70 1e-12
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 65 4e-11
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 224 bits (547), Expect = 6e-59
Identities = 111/180 (61%), Positives = 143/180 (79%), Gaps = 2/180 (1%)
Frame = -2
Query: 707 HVLGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAA 528
H LGE+K+TF E+C+ P+SVT+LIKGPNKHT+TQIKDA+ DGLRA+ N I DK V+PGAA
Sbjct: 357 HSLGEEKYTFIEECRAPKSVTLLIKGPNKHTITQIKDAIHDGLRAVFNTIVDKAVLPGAA 416
Query: 527 AFEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKL-QEESR 351
AFEI A L K + +KG+A+LG +A+A+ALLVIPKTLAVN GYDAQ+T+VKL +E++
Sbjct: 417 AFEIAAYVMLKKDVENLKGRAKLGAEAFAQALLVIPKTLAVNGGYDAQETLVKLIEEKTA 476
Query: 350 LNPE-PIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLK 174
P+ +GLDL TG A +P GI DN VKK ++S +V+A NLLLVDE+MRAGM++LK
Sbjct: 477 AGPDIAVGLDLETGGAVEPQ--GIWDNVTVKKNSISSATVLACNLLLVDEVMRAGMTNLK 534
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 89.4 bits (212), Expect = 2e-18
Identities = 37/54 (68%), Positives = 46/54 (85%)
Frame = -2
Query: 707 HVLGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKC 546
H LGE+K+TF E+C+ P+SVT+LIKGPNKHT+TQIKDA+ DGLRA+ N I D C
Sbjct: 357 HSLGEEKYTFIEECRAPKSVTLLIKGPNKHTITQIKDAIHDGLRAVFNTIVDSC 410
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/171 (24%), Positives = 91/171 (53%)
Frame = -2
Query: 704 VLGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAA 525
++GED+ K ++ +++++G + L + + ++ D L + +++ + GA A
Sbjct: 347 MIGEDRLLRFSGVKLGEACSVVLRGATQQILDESERSLHDALCVLVTHVKESKTVAGAGA 406
Query: 524 FEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLN 345
EI ++ + V GK L ++A+ AL +P + N+G D+ + + +L+ E
Sbjct: 407 SEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANG 466
Query: 344 PEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 192
+G+D+ GE T LG++++Y VK +++S + +L VD+I++A
Sbjct: 467 RHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKA 517
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/171 (24%), Positives = 91/171 (53%)
Frame = -2
Query: 704 VLGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAA 525
++GED+ K ++ +++++G + L + + ++ D L + +++ + GA A
Sbjct: 347 MIGEDRLLRFSGVKLGEACSVVLRGATQQILDESERSLHDALCVLVTHVKESKTVAGAGA 406
Query: 524 FEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLN 345
EI ++ + V GK L ++A+ AL +P + N+G D+ + + +L+ E
Sbjct: 407 SEILMSSAIAVEAQKVAGKESLAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANG 466
Query: 344 PEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 192
+G+D+ GE T LG++++Y VK +++S + +L VD+I++A
Sbjct: 467 RHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKA 517
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/171 (24%), Positives = 91/171 (53%)
Frame = -2
Query: 704 VLGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAA 525
++GED+ K ++ +++++G + L + + ++ D L + +++ + GA A
Sbjct: 347 MIGEDRLLRFSGVKLGEACSVVLRGATQQILDESERSLHDALCVLVTHVKESKTVAGAGA 406
Query: 524 FEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLN 345
EI ++ + V GK L ++A+ AL +P + N+G D+ + + +L+ E
Sbjct: 407 SEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANG 466
Query: 344 PEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 192
+G+D+ GE T LG++++Y VK +++S + +L VD+I++A
Sbjct: 467 RHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKA 517
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Frame = -2
Query: 695 EDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEI 516
+D+ EQC N ++VTI ++G NK + + K A+ D L I N + D ++ G + E+
Sbjct: 367 KDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAEL 426
Query: 515 KANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ-EESRLNPE 339
A ++ K D + G + +A+A+AL IP LA NSG D + L+ ++
Sbjct: 427 AAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKS 486
Query: 338 PIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEI 201
+G+D + +++ + K++ ++ + + +L +D++
Sbjct: 487 SLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Frame = -2
Query: 695 EDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEI 516
+D+ EQC N ++VTI ++G NK + + K A+ D L I N + D ++ G + E+
Sbjct: 367 KDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAEL 426
Query: 515 KANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ-EESRLNPE 339
A ++ K D + G + +A+A+AL IP LA NSG D + L+ ++
Sbjct: 427 AAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKS 486
Query: 338 PIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEI 201
+G+D + +++ + K++ ++ + + +L +D++
Sbjct: 487 SLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Frame = -2
Query: 695 EDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEI 516
+D+ EQC N ++VTI ++G NK + + K A+ D L I N + D ++ G + E+
Sbjct: 161 KDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAEL 220
Query: 515 KANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ-EESRLNPE 339
A ++ K D + G + +A+A+AL IP LA NSG D + L+ ++
Sbjct: 221 AAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKS 280
Query: 338 PIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEI 201
+G+D + +++ + K++ ++ + + +L +D++
Sbjct: 281 SLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDV 326
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Frame = -2
Query: 695 EDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEI 516
+D+ EQC N ++VTI ++G NK + + K A+ D L I N + D ++ G + E+
Sbjct: 367 KDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAEL 426
Query: 515 KANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ-EESRLNPE 339
A ++ K D + G + +A+A+AL IP LA NSG D + L+ ++
Sbjct: 427 AAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKS 486
Query: 338 PIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEI 201
+G+D + +++ + K++ ++ + + +L +D++
Sbjct: 487 SLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 78.6 bits (185), Expect = 4e-15
Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Frame = -2
Query: 701 LGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAF 522
+ +D+ + K+ + +I+++G N L +++ +V D L + +E K ++ G A
Sbjct: 359 ISDDELILIKGPKSRTASSIILRGANDVMLDEMERSVHDSLCVVRRVLESKKLVAGGGAV 418
Query: 521 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ---EESR 351
E + L Y T+ + +L + +A ALL+IPK LA N+ D+ D + KL+ +++
Sbjct: 419 ETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKLRAYHSKAQ 478
Query: 350 LNPEP-----IGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 195
L P+ GLDL G + GIL+ + K + L + A +L +D++++
Sbjct: 479 LIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIK 535
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 75.4 bits (177), Expect = 4e-14
Identities = 46/177 (25%), Positives = 90/177 (50%), Gaps = 8/177 (4%)
Frame = -2
Query: 701 LGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAF 522
+ +D+ + K+ + +I+++G N L +++ +V D L + +E K ++ G A
Sbjct: 359 ISDDELILIKGPKSRTASSIILRGANDVMLDEMERSVHDSLCVVRRVLESKKLVAGGGAV 418
Query: 521 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQ---EESR 351
E + L Y T+ + +L + +A ALL+IPK LA N+ D+ D + L+ +++
Sbjct: 419 ETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTFLRAYHSKAQ 478
Query: 350 LNPEP-----IGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 195
L P+ GLDL G + GIL+ + K + L + A +L +D++++
Sbjct: 479 LIPQLQHLKWAGLDLEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLIK 535
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 74.9 bits (176), Expect = 5e-14
Identities = 36/169 (21%), Positives = 85/169 (50%)
Frame = -2
Query: 701 LGEDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAF 522
+G +++ F E C Q+ T+L++G + + + + ++ D + + A ++ ++ G A
Sbjct: 351 VGSERYNFFEDCSKAQACTLLLRGGAEQFIAETERSLHDAIMIVRRAKKNDSIVAGGGAI 410
Query: 521 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 342
E++ + + ++ ++GK + AY +A +IP+ L N+G DA D + KL+
Sbjct: 411 EMELSRLIREHSKGIEGKDQAFWMAYGQAFEIIPRQLCQNAGLDALDVLNKLRHRHAQGE 470
Query: 341 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 195
+ G+D+ + + IVK+ + + + A +L +D+ ++
Sbjct: 471 KWAGIDIHREAVGDNLVACVWEPSIVKRNAITAATEAACLVLSIDQTVK 519
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 72.9 bits (171), Expect = 2e-13
Identities = 43/166 (25%), Positives = 79/166 (47%)
Frame = -2
Query: 695 EDKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEI 516
E+ F ++ + + TI+I+G ++ + ++ AV D + +D ++ GA A EI
Sbjct: 391 ENVVVFDKKSETGKVATIIIRGSSQSRIDDVERAVDDAVNTYKALTKDGKLLAGAGAVEI 450
Query: 515 KANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPEP 336
+ E+ + G + I+ +A AL +PK +A N+G +T+ KL E +
Sbjct: 451 ELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTTETLTKLYAEHVAGKKN 510
Query: 335 IGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIM 198
G+D+ E I D Y K+ + + AS +L VD+I+
Sbjct: 511 AGIDIWKRETMDAVVNNIFDLYAGKRLAIKLATDAASTILKVDQII 556
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = -2
Query: 698 GEDKFTFXEQCKNP-QSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAF 522
G+ K +NP +V+IL++G NK L + ++ D L I ++ K ++PG A
Sbjct: 369 GDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAP 428
Query: 521 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 342
E++ +L T G + +A+A+AL +IP TLA N+G T+ +L+
Sbjct: 429 EMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNHANGN 488
Query: 341 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 192
G+++ G + ++ +V + S ++L +D+I+ A
Sbjct: 489 SSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMA 538
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
Frame = -2
Query: 698 GEDKFTFXEQCKNP-QSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAF 522
G+ K +NP +V+IL++G NK L + ++ D L I ++ K ++PG A
Sbjct: 369 GDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAP 428
Query: 521 EIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNP 342
E++ +L T G + +A+A+AL +IP TLA N+G T+ +L+
Sbjct: 429 EMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNHANGN 488
Query: 341 EPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRA 192
G+++ G + ++ +V + S ++L +D+I+ A
Sbjct: 489 SSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMA 538
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 65.3 bits (152), Expect = 4e-11
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 2/176 (1%)
Frame = -2
Query: 692 DKFTFXEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEIK 513
D++ + + T++++GP+K + +++ ++D L + N + + ++PG A E+
Sbjct: 360 DEYYTYVTAETTTACTVVLRGPSKDVINEVERNLQDSLHVVRNIMINPKLVPGGGALEMA 419
Query: 512 ANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNPE-- 339
+ E+ + + G + +A AL VIP+TL N G + +L+ N E
Sbjct: 420 LSREIEQQGAKMDGVKKWPYKAIGLALEVIPRTLIQNCGGSTIRKMTELRAIHAQNAENW 479
Query: 338 PIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMRAGMSSLKG 171
G+D ++G+ L I D V+ Q+L + + LL +D+I+ ++ G
Sbjct: 480 TFGVDGTSGDLVDMNKLEIWDPLAVRIQVLKTAIETSVMLLRIDDIVSGTKKAVGG 535
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 166 YYPLRLLIPALIISSTRRRLLAITEQEFNICFFTI*LSKIPKSVGLNASPVLKSKPIGSG 345
Y+ L +L P + ++ LL + +ICFFTI L+ I +S S +L P GSG
Sbjct: 259 YFSLSILFP--MAGTSLILLLCFWIETHSICFFTIMLNIILQS--YYGSSLLAKMPPGSG 314
>Z74031-2|CAA98454.2| 568|Caenorhabditis elegans Hypothetical
protein F32D8.2 protein.
Length = 568
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 134 SFCYYFHSFIILLSTVTAFLCRIVLLQSTLTSHF*LQVE 18
SF H I+ S + FLC +L+ S + SHF ++++
Sbjct: 2 SFNLRKHQSILPSSMILMFLCFFLLIFSVIMSHFSIEIK 40
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 504 RVSFDFEGRSTGYDAFIFNGVINSAEAVTNCIFDLCQ 614
R F E R TG+ F N +A TN D CQ
Sbjct: 33 RQRFKCELRITGFGYTAFGNSTNKKDAATNAAQDFCQ 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,042,999
Number of Sequences: 27780
Number of extensions: 297146
Number of successful extensions: 721
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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