Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_H15
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ...    39   0.005
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.       35   0.12 
BT024460-1|ABC86522.1|  643|Drosophila melanogaster AT15857p pro...    31   1.9  
AY070497-1|AAL47968.1|  617|Drosophila melanogaster GH07338p pro...    31   1.9  
AE013599-697|AAF59056.1|  582|Drosophila melanogaster CG12376-PA...    31   1.9  
U60591-1|AAC47275.1| 1239|Drosophila melanogaster kuzbanian prot...    29   5.8  
BT009943-1|AAQ22412.1| 1091|Drosophila melanogaster SD03071p pro...    29   5.8  

>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
           protein.
          Length = 1219

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = +3

Query: 57  PWWNXTCAEAVTKSXEALANYRRNMTMDNYIEYXXXXXXXXXXXXLAKKDSWKSLCSSFN 236
           PWWN    +   +   A     R +T+DN ++Y              KK++  S  S+ +
Sbjct: 286 PWWNKHLDQLRKEKQLAWKKLNRTITVDNILDYRRKNAIFRYELKKRKKEASSSFTSTIH 345

Query: 237 RFTPVSRVW 263
             TP S++W
Sbjct: 346 PTTPSSKIW 354


>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
          Length = 1227

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 17/80 (21%), Positives = 29/80 (36%)
 Frame = +3

Query: 24  QSSRQKSAPPAPWWNXTCAEAVTKSXEALANYRRNMTMDNYIEYXXXXXXXXXXXXLAKK 203
           Q+ R       PWWN    +   +     ++Y+ N    N I Y             AK+
Sbjct: 279 QTKRVIHKAKVPWWNANLQQLRDQKQRLFSSYKANTNDTNLIRYKKANALFKKAVLSAKR 338

Query: 204 DSWKSLCSSFNRFTPVSRVW 263
           +S +   S  +  +   +VW
Sbjct: 339 NSLEKFTSKISPVSSTKKVW 358


>BT024460-1|ABC86522.1|  643|Drosophila melanogaster AT15857p
           protein.
          Length = 643

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +3

Query: 417 SMFLLNSFYFEELDLALSSRKNTTPGLDDIPY--IMLQNLHVSD*YEKVFVIRFYCNLCF 590
           S +  N+F FEE    ++S K+     + +PY  IM  +L+  + +E+V  +  +  LC+
Sbjct: 50  SCYAANTFPFEERCAFVASAKDCNRSTNVLPYMRIMACDLNCVNEFEQVIFLALFMGLCY 109


>AY070497-1|AAL47968.1|  617|Drosophila melanogaster GH07338p
           protein.
          Length = 617

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +3

Query: 417 SMFLLNSFYFEELDLALSSRKNTTPGLDDIPY--IMLQNLHVSD*YEKVFVIRFYCNLCF 590
           S +  N+F FEE    ++S K+     + +PY  IM  +L+  + +E+V  +  +  LC+
Sbjct: 24  SCYAANTFPFEERCAFVASAKDCNRSTNVLPYMRIMACDLNCVNEFEQVIFLALFMGLCY 83


>AE013599-697|AAF59056.1|  582|Drosophila melanogaster CG12376-PA
           protein.
          Length = 582

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +3

Query: 417 SMFLLNSFYFEELDLALSSRKNTTPGLDDIPY--IMLQNLHVSD*YEKVFVIRFYCNLCF 590
           S +  N+F FEE    ++S K+     + +PY  IM  +L+  + +E+V  +  +  LC+
Sbjct: 24  SCYAANTFPFEERCAFVASAKDCNRSTNVLPYMRIMACDLNCVNEFEQVIFLALFMGLCY 83


>U60591-1|AAC47275.1| 1239|Drosophila melanogaster kuzbanian
           protein.
          Length = 1239

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = +3

Query: 330 ESFLEKLAQPSNNNDNISGLFEFNDGSQWSMFLLNSFYFEELDLALSSRKNTTPGLDDIP 509
           E+F++K+A+ +  +  +    E +  S  + F   + YFE+        +N    L D  
Sbjct: 202 ENFIKKIAESTTTSQQLPEYTESSSSSSTTTFPPTTEYFED-----EKERNAEDEL-DFH 255

Query: 510 YIMLQNLHVSD*YEKV 557
            I+ +  HV D YE V
Sbjct: 256 SIIYKESHVEDAYENV 271


>BT009943-1|AAQ22412.1| 1091|Drosophila melanogaster SD03071p
           protein.
          Length = 1091

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 20/76 (26%), Positives = 35/76 (46%)
 Frame = +3

Query: 330 ESFLEKLAQPSNNNDNISGLFEFNDGSQWSMFLLNSFYFEELDLALSSRKNTTPGLDDIP 509
           E+F++K+A+ +  +  +    E +  S  + F   + YFE+        +N    L D  
Sbjct: 202 ENFIKKIAESTTTSQQLPEYTESSSSSSTTTFPPTTEYFED-----EKERNAEDEL-DFH 255

Query: 510 YIMLQNLHVSD*YEKV 557
            I+ +  HV D YE V
Sbjct: 256 SIIYKESHVEDAYENV 271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,132,768
Number of Sequences: 53049
Number of extensions: 455987
Number of successful extensions: 1171
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)