Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_H15
         (675 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77652-13|CAB01120.2|  308|Caenorhabditis elegans Hypothetical p...    29   4.0  
AL590342-5|CAC35862.1|  507|Caenorhabditis elegans Hypothetical ...    27   9.2  
AL032627-24|CAA21552.1|  507|Caenorhabditis elegans Hypothetical...    27   9.2  
AL032622-8|CAA21503.1|  507|Caenorhabditis elegans Y66A7A.8 prot...    27   9.2  
AF022972-3|AAC48235.2|  526|Caenorhabditis elegans Udp-glucurono...    27   9.2  

>Z77652-13|CAB01120.2|  308|Caenorhabditis elegans Hypothetical
           protein C06B3.11 protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 358 LVITMIIFL-VYLNLMTEVSGACFYLTLFILKNLTWLCLQERIQPLVLTIFLILCFKICT 534
           L I +I FL +  N +  V+    Y T+F  K L  L     I PLV + +L L FK CT
Sbjct: 95  LHIVLISFLMISFNRLCAVAFPIAYQTVFGKKWLMILISINWIVPLVASTYL-LTFKQCT 153

Query: 535 F 537
           F
Sbjct: 154 F 154


>AL590342-5|CAC35862.1|  507|Caenorhabditis elegans Hypothetical
           protein Y66A7A.8 protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 355 SLVITMIIFLVYLNLMTEVSGACFYLTLFILKNL 456
           SL +++ ++L+ LNL  EVS  C Y+ + I+  +
Sbjct: 300 SLTLSLNLYLI-LNLSLEVSNECKYIPVLIINEI 332


>AL032627-24|CAA21552.1|  507|Caenorhabditis elegans Hypothetical
           protein Y66A7A.8 protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 355 SLVITMIIFLVYLNLMTEVSGACFYLTLFILKNL 456
           SL +++ ++L+ LNL  EVS  C Y+ + I+  +
Sbjct: 300 SLTLSLNLYLI-LNLSLEVSNECKYIPVLIINEI 332


>AL032622-8|CAA21503.1|  507|Caenorhabditis elegans Y66A7A.8
           protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = +1

Query: 355 SLVITMIIFLVYLNLMTEVSGACFYLTLFILKNL 456
           SL +++ ++L+ LNL  EVS  C Y+ + I+  +
Sbjct: 300 SLTLSLNLYLI-LNLSLEVSNECKYIPVLIINEI 332


>AF022972-3|AAC48235.2|  526|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein40 protein.
          Length = 526

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = -2

Query: 320 IIFGQISINVNSLKSSNKIPHSGYWSESIKR*TKT----FPTVFLSQFDNNFFHRI 165
           I  G IS+N+++LKSS K+     W + +    KT    F +V LSQ D  F +++
Sbjct: 265 IQIGGISVNLDTLKSSGKLTEE--WDQILNLREKTLLVSFGSVILSQ-DMPFAYKV 317


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,309,052
Number of Sequences: 27780
Number of extensions: 251252
Number of successful extensions: 664
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)