Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_H14
(671 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0347 - 42898143-42898534,42899101-42899767 65 4e-11
03_04_0049 - 16814121-16814515,16815659-16815788,16815905-168159... 55 6e-08
05_05_0186 + 23071429-23072034,23072182-23072331,23073247-23073552 46 3e-05
08_01_0708 + 6261524-6262249,6262776-6262925,6263760-6264065 45 5e-05
06_03_0501 + 21476715-21476785,21477045-21477786,21478097-214782... 43 3e-04
04_04_1130 - 31112318-31112623,31113131-31113280,31113613-31114251 42 6e-04
07_01_0889 + 7426680-7427396,7428073-7428222,7429296-7429601 38 0.006
05_05_0184 + 23059430-23060062,23060654-23060803,23061033-23061110 31 0.84
11_01_0129 - 1073002-1073073,1073463-1073585,1073667-1073732,107... 30 1.9
05_02_0032 - 5842333-5842950 30 1.9
05_02_0047 + 6006808-6007129,6009229-6009890,6009980-6010129,601... 29 2.6
09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715 29 3.4
02_02_0259 - 8379640-8380209 29 3.4
12_02_0803 + 23318429-23318552,23318688-23319877,23320724-233215... 29 4.5
07_03_0451 + 18340166-18340533,18340576-18341006,18343057-183431... 29 4.5
06_01_0420 + 2998269-2999195 29 4.5
04_04_0367 + 24736376-24736806,24738257-24738407,24739334-24739420 29 4.5
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 28 5.9
05_04_0371 + 20723314-20723838 28 5.9
03_06_0488 - 34281623-34283431 28 5.9
11_06_0012 + 19251085-19251666 28 7.8
03_06_0655 - 35310640-35311126,35311217-35311320,35311461-353115... 28 7.8
03_02_0413 - 8224494-8224553,8224838-8225004,8225666-8225771,822... 28 7.8
03_02_0089 + 5561622-5561855,5562748-5563247,5563411-5563501 28 7.8
>01_07_0347 - 42898143-42898534,42899101-42899767
Length = 352
Score = 65.3 bits (152), Expect = 4e-11
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Frame = -2
Query: 625 VSHTAPCNRSSS--GTIGLLCALFVHSLLEGLAIGLQEDGTQVLLLLGAVASHKFVVAFC 452
V+H A R+SS + L+ AL HS+ EG+AIG+ ++ L + HK A
Sbjct: 186 VAHPAMLVRTSSFEDAVLLIVALCFHSVFEGIAIGVSASKSEAWRNLWTIGLHKIFAAVA 245
Query: 451 LGAELCASLPGR-MCAQMVCILIFSGGSVAGIGMGAALENVRTLKDS-VAVPIMQALAAG 278
+G L +P R +V L F+ S G+G+G A++ + + I LA G
Sbjct: 246 MGIALLRMIPKRPFLMTVVYSLAFAVSSPVGVGIGIAIDATSQGRAADWTYAISMGLATG 305
Query: 277 TLLYVTVSEVLPRERANWHERKSTAGIAQFTAVAVGFAAMYLCTVF 140
+YV ++ ++ + H + + +F AV +G A M + ++
Sbjct: 306 VFIYVAINHLIAKGYRPHHPTAADKPLFKFLAVLLGVAVMAVVMIW 351
>03_04_0049 -
16814121-16814515,16815659-16815788,16815905-16815963,
16816610-16817102
Length = 358
Score = 54.8 bits (126), Expect = 6e-08
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Frame = -2
Query: 604 NRSSSG-TIGLLCALFVHSLLEGLAIGLQEDGTQVLLLLGAVASHKFVVAFCLGAELCAS 428
N S+ G ++ L+ AL HS+ EG+AIG+ E L ++ HK A +G L
Sbjct: 199 NASTLGDSVLLIAALCFHSVFEGIAIGVAETKADAWKALWTISLHKIFAAIAMGIALLRM 258
Query: 427 LPGR-MCAQMVCILIFSGGSVAGIGMGAALENVRTLKDSVA---VPIMQALAAGTLLYVT 260
LP R + F+ S G+G+G ++ T + VA + LA G +YV+
Sbjct: 259 LPDRPFLSCFGYAFAFAVSSPVGVGIGIVID--ATTQGRVADWIFAVSMGLATGIFIYVS 316
Query: 259 VSEVLPRERANWHERKSTAGIAQFTAVAVGFAAMYLCTVF 140
++ +L + + + AV +G A + + ++
Sbjct: 317 INHLLSKGYTPLRPVAADTPAGRLLAVVLGVAVIAVVMIW 356
>05_05_0186 + 23071429-23072034,23072182-23072331,23073247-23073552
Length = 353
Score = 46.0 bits (104), Expect = 3e-05
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Frame = -2
Query: 559 VHSLLEGLAIGLQEDGTQVLLLLGAVASHKFVVAFCLGAELCASLPGRMCAQMVCILIFS 380
VHSL+ G+++G + + V L+ A+ H+F LG R+ + + L FS
Sbjct: 210 VHSLIIGMSLGASDFPSTVRPLVPALTFHQFFEGIGLGG-CIVQAKFRVRSVVTMALFFS 268
Query: 379 GGSVAGIGMGAALENVRTLKDSVAVPI---MQALAAGTLLYVTVSEVLPRERANWH-ERK 212
+ AGI +G + +V A+ + ++A AAG L+Y+ + ++L + +R+
Sbjct: 269 LTTPAGIVVGIGISSVYDANSPTALVVQGLLEAAAAGILVYMALVDILAEDFMKTKVQRR 328
Query: 211 STAGIAQFTAVAVGFAAMYLCTVF 140
+A A+ +G M + ++
Sbjct: 329 GRLQLAMNVALLLGAGLMSMIAIW 352
>08_01_0708 + 6261524-6262249,6262776-6262925,6263760-6264065
Length = 393
Score = 45.2 bits (102), Expect = 5e-05
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Frame = -2
Query: 658 PGEVDNPQMCHVSHTAPCNRSSSGTIGLLCALFVHSLLEGLAIGLQEDGTQVLLLLGAVA 479
P +P+ V+ T +R S + L + VHS++ G+++G + + L+GA++
Sbjct: 220 PAAATSPEDASVAETIR-HRVVSQVLEL--GILVHSVIIGVSLGASLRPSSIRPLVGALS 276
Query: 478 SHKFVVAFCLGAELCASLPGRMCAQMVCILIFSGGSVAGIGMGAALENVRTLKDSVAV-- 305
H+F LG + A ++ FS + GI +G A+ + + S A+
Sbjct: 277 FHQFFEGIGLGG-CIVQANFKAKATVIMATFFSLTAPVGIALGIAISSSYSKHSSTALVV 335
Query: 304 -PIMQALAAGTLLYVTVSEVLPRERANWHERKST-AGIAQFTAVAVGFAAMYLCTVF 140
+ + AAG L+Y+++ ++L + N + +T +A + A+ +G M L ++
Sbjct: 336 EGVFNSAAAGILIYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIW 392
>06_03_0501 +
21476715-21476785,21477045-21477786,21478097-21478246,
21478350-21478589,21479968-21480048,21480144-21480185,
21480953-21481033,21481271-21481368,21482574-21482667,
21482733-21482861,21483881-21483931,21484023-21484049,
21484280-21484387,21484956-21485201
Length = 719
Score = 42.7 bits (96), Expect = 3e-04
Identities = 27/107 (25%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = -2
Query: 556 HSLLEGLAIGLQEDGTQVLLLLGAVASHKFVVAFCLGAELCASLPGRMCAQMVCILIFSG 377
HS++ GL++G+ + + L+ A++ H+F F LG + + A ++ F+
Sbjct: 280 HSVIIGLSLGVSQSPCTIKPLVAALSFHQFFEGFALGGCISEAQLKNFSAFLMA-FFFAI 338
Query: 376 GSVAGIGMGAALE---NVRTLKDSVAVPIMQALAAGTLLYVTVSEVL 245
+ AGI +GAA+ N + + V I+ +++AG L+Y+ + +++
Sbjct: 339 TTPAGITVGAAVASFYNPNSPRALVVEGILDSMSAGILIYMALVDLI 385
>04_04_1130 - 31112318-31112623,31113131-31113280,31113613-31114251
Length = 364
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = -2
Query: 565 LFVHSLLEGLAIGLQEDGTQVLLLLGAVASHKFVVAFCLGAELCASLPGRMCAQMVCILI 386
+ VHS++ G+++G + + L+GA++ H+F LG ++ A ++ +
Sbjct: 219 ILVHSVIIGVSLGASVRPSTIRPLVGALSFHQFFEGVGLGG-CIVQANFKVRATVIMAIF 277
Query: 385 FSGGSVAGIGMGAALE---NVRTLKDSVAVPIMQALAAGTLLYVTVSEVLPRERAN 227
FS + GI +G A+ NV + V + + +AG L+Y+++ ++L + N
Sbjct: 278 FSLTAPVGIVLGIAISSSYNVHSSTAFVVEGVFNSASAGILIYMSLVDLLATDFNN 333
>07_01_0889 + 7426680-7427396,7428073-7428222,7429296-7429601
Length = 390
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = -2
Query: 565 LFVHSLLEGLAIGLQEDGTQVLLLLGAVASHKFVVAFCLGAELC-ASLPGRMCAQMVCIL 389
+ VHS++ G+++G ++ + L+ A++ H+ LG + A R MV L
Sbjct: 245 IVVHSVIIGISLGASQNPETIKPLVVALSFHQMFEGMGLGGCIVQAKFKVRSIVTMV--L 302
Query: 388 IFSGGSVAGIGMGAALENVRTLKDSVAVP---IMQALAAGTLLYVTVSEVLPRERAN 227
F + GI +G + +V A+ I+ ++AAG L+Y+ + ++L + N
Sbjct: 303 FFCLTTPVGIAVGVGISSVYNESSPTALVVEGILNSVAAGILIYMALVDLLAEDFMN 359
>05_05_0184 + 23059430-23060062,23060654-23060803,23061033-23061110
Length = 286
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Frame = -2
Query: 565 LFVHSLLEGLAIGLQEDGTQVLLLLGAVASHKFV----VAFCLGAELCAS 428
+ VHS++ G+++G E + + L+ A+ H+F + C+ LCAS
Sbjct: 217 IIVHSIIIGISLGASESPSTIRPLVAALTFHQFFEGIGLGGCIVQSLCAS 266
>11_01_0129 -
1073002-1073073,1073463-1073585,1073667-1073732,
1074227-1074347,1074536-1074603,1074792-1074863,
1076045-1076222,1077554-1077888
Length = 344
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 270 SSVPAASACIIGTATESFSVLTFSKAAPMPIPATEPPLNIRMHTIWAHIRPGRL 431
SS +AC+IG SV+ A P+ IPA P +R RP R+
Sbjct: 8 SSAKLVAACVIGGIVLGASVVALHLAGPVAIPALPPVDALRRRFRRGRRRPVRV 61
>05_02_0032 - 5842333-5842950
Length = 205
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 383 QRWLRRRNRHGSSLGKCQNAEGFCGGTDYAGTCGGNTALRDCERSSS 243
+RW R + R G +GK A+G GG ++A T T R SS
Sbjct: 72 RRWRRWQGRRGDGIGKVNLADG--GGDEFAVTAARATTAGCLRRVSS 116
>05_02_0047 +
6006808-6007129,6009229-6009890,6009980-6010129,
6010765-6010857,6011370-6011675
Length = 510
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 556 HSLLEGLAIGLQEDGTQVLLLLGAVASHKFVVAFCLG 446
HS++ GL++G+ + L+ A++ H+F F LG
Sbjct: 337 HSVIIGLSLGVSRSPCTIRPLVAALSFHQFFEGFALG 373
>09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715
Length = 462
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = -2
Query: 592 SGTIGLLCALF-----VHSLLEGLAIGLQEDGTQVLLLLGAVASHKFVVAFCLGAELCAS 428
S ++ +C+L ++S ++ I ++ +LL ++ F VAF +G L +
Sbjct: 323 SNSLAFICSLLATVSLLYSGIQSRDISIRRRYYAFSMLLMQSSTTSFTVAFAMGMYLVLA 382
Query: 427 LPGRMCAQMVCILIFSGGSVAGIGMGAALENVRTLKDSVAVPIMQALAAGTLLY 266
A VCI+ F + +G +L TL+ + + + A LL+
Sbjct: 383 PVTLNAAVSVCIIAFVSLLPGNMEIGVSLAIANTLRIRLGIWAAMSQARPVLLF 436
>02_02_0259 - 8379640-8380209
Length = 189
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 450 SALSCALVCRAGCAPKWCASLYSAVAPSPESA 355
+A + L C GC +WC A A P +A
Sbjct: 25 AAAAAVLFCAVGCVSRWCGDAGGAPAALPTTA 56
>12_02_0803 +
23318429-23318552,23318688-23319877,23320724-23321528,
23321938-23322417,23322535-23322815,23323207-23323302,
23323423-23323548,23324100-23325890
Length = 1630
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = -1
Query: 332 QNAEGFCGGTDYAGTCGGNTALRDCERSSSTRESKLARAQEHRWYCTIYSSSSRLRGY 159
+NAE CG D G NT+L +E +L AQEHR C + LR Y
Sbjct: 438 ENAEN-CG--DQIVITGQNTSLLSLLEMEEFQERELEDAQEHRRKCEV-EEREALRAY 491
>07_03_0451 +
18340166-18340533,18340576-18341006,18343057-18343184,
18343329-18343958,18344761-18345480
Length = 758
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 508 QVLLLLGAVASHKFVVAFCLGAELCASLPGRMCAQMVCILIF 383
++ LL + FVVAF LG L + A VC++IF
Sbjct: 648 EISALLLRSSGRSFVVAFALGLYLVLAPVAHTIATAVCVIIF 689
>06_01_0420 + 2998269-2999195
Length = 308
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +3
Query: 204 AVLLRSCQFALSRGRTSLTVT*SSVPAASACIIGTATESFSVLTFSKAAPMPIPATEPPL 383
A R F+ G+ + P S + GTAT + V + P P P PP+
Sbjct: 171 ATAARCLTFSSGGGKAVAAHAVAMEPGPSCVVSGTATGHYGVAVRVETPPPPPPPRPPPV 230
Query: 384 NIR 392
R
Sbjct: 231 RER 233
>04_04_0367 + 24736376-24736806,24738257-24738407,24739334-24739420
Length = 222
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/76 (30%), Positives = 31/76 (40%)
Frame = -1
Query: 509 SGAASARSCRLSQVCRGVLPRR*AVR*SAGPDVRPNGVHPYIQRWLRRRNRHGSSLGKCQ 330
+GAA A R G++ A R AG R V P+I+ L+ +SL
Sbjct: 111 AGAAQAALVRAPAGAAGLVGVGLATRAGAGVVGRCTFV-PFIKLQLQNIQNFRASLSSLP 169
Query: 329 NAEGFCGGTDYAGTCG 282
+ CGG G CG
Sbjct: 170 DTGSNCGGRGIVGACG 185
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 237 SRGRTSLTVT*SSVPAASACIIGTATESFSVLTFSKAAPMPIPATEPP 380
S +S + + SS P+ +C TA + SK P+P P PP
Sbjct: 268 SPANSSSSSSSSSAPSTPSCSSDTAASRSRLPELSKLPPIPPPPPPPP 315
>05_04_0371 + 20723314-20723838
Length = 174
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 335 IFQGCSHADSGDGATAEYKDAHHLGAHPARQTSAQLSAEAKRHDKLVR 478
+F + GDG A + +++ +G P ++ + L AKR + V+
Sbjct: 46 LFASATKVTIGDGRKASFVESNWIGKQPLKELAQTLYNHAKRKGRTVQ 93
>03_06_0488 - 34281623-34283431
Length = 602
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2
Query: 502 LLLLGAVASHKFVVAFCLGAELCASLPG 419
L+L GAV +KF F L A CA+LPG
Sbjct: 116 LMLRGAVVPNKFTFPFLLKA--CAALPG 141
>11_06_0012 + 19251085-19251666
Length = 193
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/72 (33%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Frame = -1
Query: 461 GVLPRR*AVR*SAGPDVRPNGVHPYIQRWLRRRNRHGS--SLGKCQNAEGFCGGTDYAGT 288
GV R A R R Q+ LRRR RHG G G GG G+
Sbjct: 52 GVEAREAACRRGVVAKARTTATAVEAQQALRRR-RHGGRRDSGGGAGGRGSRGGVGDLGS 110
Query: 287 CGGNTALRDCER 252
CGG + ER
Sbjct: 111 CGGTAIVAGGER 122
>03_06_0655 -
35310640-35311126,35311217-35311320,35311461-35311523,
35311568-35311686,35311777-35311826,35311939-35312081
Length = 321
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 650 GG*PSNVPRESYGSVQ*EFIRNNRI-VMRSLRSQPTGRSGYWSSRRWNSGA 501
GG P N P +G F+ N R + +++ GR+G+ +R W+S A
Sbjct: 275 GGQPLNEPVVQHGP----FVMNTRAEIQQAMEDYYYGRNGFEKARHWSSTA 321
>03_02_0413 -
8224494-8224553,8224838-8225004,8225666-8225771,
8226068-8226105,8226177-8226264,8226688-8226741,
8226810-8226918,8227280-8227362,8227444-8227506,
8227585-8227647,8227906-8227977,8228056-8228094,
8228182-8228237,8228316-8228375,8228444-8228558,
8228590-8228810,8228978-8229259,8229390-8229504
Length = 596
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -2
Query: 364 GIGMGAALENVRTLKDSVAVPIMQALAAGTLLYVTVSEVLPRERAN 227
G G G ++ V+ + D+V +P++ + AGT+ + SEV + A+
Sbjct: 522 GQGCGFDIDLVKMVSDAVTIPVIASSGAGTVEH--FSEVFEKTNAS 565
>03_02_0089 + 5561622-5561855,5562748-5563247,5563411-5563501
Length = 274
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/76 (23%), Positives = 32/76 (42%)
Frame = +2
Query: 311 HRILQRSDIFQGCSHADSGDGATAEYKDAHHLGAHPARQTSAQLSAEAKRHDKLVRGDSS 490
H + R +GC D A + + H GA P+R+ ++ D GDS+
Sbjct: 36 HGLADRRGRRRGCRPRRQLDAA-GDVRQHLHTGAPPSRRRASYTDRVLSYIDNSNIGDSA 94
Query: 491 *QKQHLSSIFLKTNSQ 538
++ L + +TN +
Sbjct: 95 TRRNRLDRLMFRTNER 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,305,383
Number of Sequences: 37544
Number of extensions: 446211
Number of successful extensions: 1631
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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