Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_H13
         (568 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943...    71   5e-13
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116...    71   9e-13
08_02_0163 + 13470178-13470335,13470635-13470656,13470885-134710...    69   3e-12
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717...    66   2e-11
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549...    59   2e-09
08_01_0181 + 1530623-1531626,1531723-1531902,1531998-1532177,153...    32   0.37 
12_01_0144 - 1097579-1097604,1097940-1098127,1098567-1098720,109...    30   1.5  
11_01_0142 - 1169007-1169032,1169351-1169538,1169978-1170131,117...    27   7.9  

>03_02_0555 +
           9431451-9431688,9432685-9432803,9432886-9433079,
           9433174-9433430,9433544-9433650,9433715-9433888,
           9434359-9434490,9434776-9434955,9435062-9435265
          Length = 534

 Score = 71.3 bits (167), Expect = 5e-13
 Identities = 32/57 (56%), Positives = 43/57 (75%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q  MLG RL+PL++R HPDLA KITGMLLE+ NSE++ +L  +  L AK++E V +L
Sbjct: 451 QKNMLGNRLYPLVERHHPDLASKITGMLLELGNSEVVMLLYSSNMLSAKIEECVKLL 507


>09_01_0079 -
           1159963-1160211,1160303-1160509,1160631-1160801,
           1161732-1161869,1162184-1162273,1162354-1162431,
           1162510-1163166,1163245-1163363,1164305-1164584
          Length = 662

 Score = 70.5 bits (165), Expect = 9e-13
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q  MLGE L+PL+ ++  + A K+TGMLLE+D +E+LH+LE  E+LKAKV EA+ VL
Sbjct: 578 QRMMLGENLYPLVDQLEHEQAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVL 634


>08_02_0163 +
           13470178-13470335,13470635-13470656,13470885-13471055,
           13471157-13471363,13471458-13471700
          Length = 266

 Score = 68.9 bits (161), Expect = 3e-12
 Identities = 31/57 (54%), Positives = 44/57 (77%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q  MLGE L+PL+ ++  D A K+TGMLLE+D +E+LH++E  ++LKAKV EA+ VL
Sbjct: 184 QRLMLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVL 240


>04_04_0435 -
           25170348-25170593,25170989-25171189,25171580-25171756,
           25172284-25172418,25173131-25173262,25173292-25173369,
           25173452-25174108,25174210-25174328,25175897-25176173
          Length = 673

 Score = 65.7 bits (153), Expect = 2e-11
 Identities = 30/57 (52%), Positives = 44/57 (77%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q  +LGE L+PL++ +  + A K+TGMLLE+D +E+LH+LE  E+LK+KV EA+ VL
Sbjct: 590 QRTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVL 646


>06_03_0614 -
           22753092-22753349,22754059-22754277,22754712-22754960,
           22755186-22755275,22755379-22755456,22755562-22756337,
           22757042-22757384
          Length = 670

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 26/57 (45%), Positives = 45/57 (78%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q ++LG+ LFPL++++  + A K+TGMLLE+D +E+L+++E  ++L+ KV EA+ VL
Sbjct: 583 QREILGDMLFPLVEQLVNEKAYKVTGMLLELDKTEVLNLVESPDTLRDKVAEAMKVL 639


>08_01_0181 +
           1530623-1531626,1531723-1531902,1531998-1532177,
           1532363-1532442,1532528-1532701,1533001-1533118,
           1533223-1533301
          Length = 604

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = -2

Query: 540 FPLIQRMHPDLAGKITGMLL--EIDNSELLHMLEHAE-SLKAKVDEAVAVL 397
           F  +QR+ P+  GKI G++L  E D  EL+ +    E +L AK+++  A L
Sbjct: 11  FARVQRVEPEHVGKIFGVMLLREPDEDELVQLAYGPEATLLAKIEDTKAAL 61


>12_01_0144 -
           1097579-1097604,1097940-1098127,1098567-1098720,
           1098825-1099092,1099310-1099550,1099669-1099833,
           1099898-1100298
          Length = 480

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 543 LFPLIQRMHPDLAGKITGMLLEIDNSEL 460
           +F  +Q + P+LA  I GMLL  DN+E+
Sbjct: 10  VFARLQALEPNLAPNIIGMLLTKDNNEM 37


>11_01_0142 -
           1169007-1169032,1169351-1169538,1169978-1170131,
           1170565-1170656,1170782-1170961,1171080-1171244,
           1171309-1171709
          Length = 401

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 543 LFPLIQRMHPDLAGKITGMLLEIDNSEL 460
           +F  +Q + P+LA  I GMLL  D +E+
Sbjct: 10  VFARLQALEPNLAPNIIGMLLTKDKNEM 37


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,416,035
Number of Sequences: 37544
Number of extensions: 132445
Number of successful extensions: 262
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)