Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_H13
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L05109-1|AAA70421.1|  632|Drosophila melanogaster poly(A)-bindin...    92   4e-19
AY118528-1|AAM49897.1|  634|Drosophila melanogaster LD24412p pro...    92   4e-19
AE013599-2628|AAS64811.1|  634|Drosophila melanogaster CG5119-PH...    92   4e-19
AE013599-2627|AAM68178.1|  634|Drosophila melanogaster CG5119-PG...    92   4e-19
AE013599-2626|AAF57747.1|  634|Drosophila melanogaster CG5119-PF...    92   4e-19
AE013599-2625|AAM68177.1|  634|Drosophila melanogaster CG5119-PE...    92   4e-19
AE013599-2624|AAM68176.1|  634|Drosophila melanogaster CG5119-PD...    92   4e-19
AE013599-2623|AAF57746.1|  634|Drosophila melanogaster CG5119-PC...    92   4e-19
AE013599-2622|AAF57745.1|  634|Drosophila melanogaster CG5119-PB...    92   4e-19
AE013599-2621|AAM68175.1|  634|Drosophila melanogaster CG5119-PA...    92   4e-19
L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d...    54   2e-07
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA...    54   2e-07

>L05109-1|AAA70421.1|  632|Drosophila melanogaster poly(A)-binding
           protein protein.
          Length = 632

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 566 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 622


>AY118528-1|AAM49897.1|  634|Drosophila melanogaster LD24412p
           protein.
          Length = 634

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 568 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624


>AE013599-2628|AAS64811.1|  634|Drosophila melanogaster CG5119-PH,
           isoform H protein.
          Length = 634

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 568 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624


>AE013599-2627|AAM68178.1|  634|Drosophila melanogaster CG5119-PG,
           isoform G protein.
          Length = 634

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 568 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624


>AE013599-2626|AAF57747.1|  634|Drosophila melanogaster CG5119-PF,
           isoform F protein.
          Length = 634

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 568 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624


>AE013599-2625|AAM68177.1|  634|Drosophila melanogaster CG5119-PE,
           isoform E protein.
          Length = 634

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 568 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624


>AE013599-2624|AAM68176.1|  634|Drosophila melanogaster CG5119-PD,
           isoform D protein.
          Length = 634

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 568 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624


>AE013599-2623|AAF57746.1|  634|Drosophila melanogaster CG5119-PC,
           isoform C protein.
          Length = 634

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 568 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624


>AE013599-2622|AAF57745.1|  634|Drosophila melanogaster CG5119-PB,
           isoform B protein.
          Length = 634

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 568 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624


>AE013599-2621|AAM68175.1|  634|Drosophila melanogaster CG5119-PA,
           isoform A protein.
          Length = 634

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 43/57 (75%), Positives = 52/57 (91%)
 Frame = -2

Query: 567 QXQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
           Q Q+LGERL+P+I+ MH +LAGKITGMLLEI+NSELLHM+E  E+LKAKV+EAVAVL
Sbjct: 568 QKQILGERLYPMIEHMHANLAGKITGMLLEIENSELLHMIEDQEALKAKVEEAVAVL 624


>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic discs
            protein protein.
          Length = 2895

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 25/55 (45%), Positives = 38/55 (69%)
 Frame = -2

Query: 561  QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
            Q +GERL+P I  ++   A KITGMLLEI   +LL ++   E+L+ KV+EA+ ++
Sbjct: 2512 QQIGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEII 2566


>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
            protein.
          Length = 2885

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 25/55 (45%), Positives = 38/55 (69%)
 Frame = -2

Query: 561  QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 397
            Q +GERL+P I  ++   A KITGMLLEI   +LL ++   E+L+ KV+EA+ ++
Sbjct: 2502 QQIGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEII 2556


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,147,277
Number of Sequences: 53049
Number of extensions: 249948
Number of successful extensions: 540
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)