Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_H10
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   3.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.7  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   3.7  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   3.7  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   6.4  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 268 PFFTLINLIFSKANNCIIVHIYMYGH 345
           P  T++  +F+K  +CI   IY   H
Sbjct: 315 PVSTMLPAVFAKTVSCIDPWIYAINH 340


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -3

Query: 562 DLVSVQKYFYIY 527
           D+V +QKYFY++
Sbjct: 531 DMVYLQKYFYLF 542


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -3

Query: 562 DLVSVQKYFYIY 527
           D+V +QKYFY++
Sbjct: 531 DMVYLQKYFYLF 542


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 409 FKYCIPFSSQIYFHS 365
           F YCIP    IY++S
Sbjct: 218 FSYCIPMILIIYYYS 232


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 268 PFFTLINLIFSKANNCIIVHIYMYGH 345
           P  T++  +F+K  +CI   IY   H
Sbjct: 315 PVSTMLPAVFAKTVSCIDPWIYAINH 340


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 176 YFSYINLNELFCVCGLKTLQYITLSHLR 93
           Y  +I  N +F VCGL  L    L HL+
Sbjct: 10  YLLFI-FNFVFAVCGLGILTLGVLIHLQ 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,081
Number of Sequences: 438
Number of extensions: 4009
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)