Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_H08
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.033
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.23
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 32 0.40
U41109-13|AAB37036.1| 264|Caenorhabditis elegans Posterior segr... 31 0.93
AB006208-1|BAA33854.1| 264|Caenorhabditis elegans cytoplasmic z... 31 0.93
Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical pr... 29 2.1
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 29 2.1
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 29 2.1
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81105-5|CAB03218.2| 331|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical pr... 28 5.0
U40797-8|AAL08029.1| 332|Caenorhabditis elegans Serpentine rece... 28 5.0
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 28 5.0
AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical ... 28 5.0
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 28 5.0
AF045646-5|AAK29828.1| 225|Caenorhabditis elegans Hypothetical ... 28 6.6
AC024761-9|AAP13757.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.6
Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical p... 27 8.7
U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical pr... 27 8.7
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 27 8.7
AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical... 27 8.7
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Frame = -3
Query: 646 LCSDFLKGYCERGTKCEYRH-VNITNETKKRLM--RTKQITLLKVKNQHTEKPNKNESV- 479
LC F +G C +G KC++ H + + +T K+ + ++++ + N++ + NE V
Sbjct: 95 LCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADSREVEKDEETNENWDSDKLNEVVN 154
Query: 478 EESQNERNMD--CRYYRDIKPN 419
++++N+ +D C+Y+ + N
Sbjct: 155 KKNKNKHMIDIVCKYFLEAVEN 176
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.5 bits (78), Expect = 0.033
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 646 LCSDFLKGYCERGTKCEYRHVNITN 572
+CS F+KG C+RG +C YRH T+
Sbjct: 167 ICSFFVKGECKRGEECPYRHEKPTD 191
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 32.7 bits (71), Expect = 0.23
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -3
Query: 646 LCSDFLKGYCERGTKCEYRH 587
+C DFLK C RG++C++ H
Sbjct: 58 VCRDFLKNICNRGSRCKFYH 77
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 646 LCSDFLKGYCERGT-KCEYRHVNITNETKKR 557
+C +F G C RG +C Y HVN+ E +R
Sbjct: 146 ICKEFQTGRCARGVNRCRYWHVNVDLERDRR 176
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 31.9 bits (69), Expect = 0.40
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 114 SKRAGSGPRAGFCXPREXTRQTDKEGR 34
++R GS PRAG C PR+ TDK R
Sbjct: 118 ARRKGSCPRAGICSPRDTFFWTDKHTR 144
>U41109-13|AAB37036.1| 264|Caenorhabditis elegans Posterior
segregation protein 1 protein.
Length = 264
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 646 LCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITLLKVKNQHTEKPNKNESVEES 470
LC F + G C+ GT+C++ H + K T K ++ N + V +
Sbjct: 146 LCDKFSMTGNCKYGTRCQFIHKIVDGNAAKLASGAHANTSSKSPARNAAAHNHSLFVPQG 205
Query: 469 QNERNMD 449
+R+MD
Sbjct: 206 STDRSMD 212
>AB006208-1|BAA33854.1| 264|Caenorhabditis elegans cytoplasmic
zinc-finger protein protein.
Length = 264
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -3
Query: 646 LCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITLLKVKNQHTEKPNKNESVEES 470
LC F + G C+ GT+C++ H + K T K ++ N + V +
Sbjct: 146 LCDKFSMTGNCKYGTRCQFIHKIVDGNAAKLASGAHANTSSKSPARNAAAHNHSLFVPQG 205
Query: 469 QNERNMD 449
+R+MD
Sbjct: 206 STDRSMD 212
>Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical
protein C35D6.4 protein.
Length = 203
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 646 LCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITL 530
LC++F G+C+ G +C++ H ++ + + + T+ IT+
Sbjct: 134 LCNNFSTTGHCKYGIRCQFIHRSMDSTSSNQSNETENITI 173
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 283 SICPPLSYIVIKLTVSFTQTE*MTADFLAYIESVLLRHNLLWYLRSLV*CPDSICNPY 456
S P L Y ++ TVS +T + Y+ + RH+ +W S+ P+ I PY
Sbjct: 171 SYSPSLFYFMLWRTVSGIFAGGLTVVQMVYMVENIPRHHRMWIQNSITWSPNLIIFPY 228
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 283 SICPPLSYIVIKLTVSFTQTE*MTADFLAYIESVLLRHNLLWYLRSLV*CPDSICNPY 456
S P L Y ++ TVS +T + Y+ + RH+ +W S+ P+ I PY
Sbjct: 171 SYSPSLFYFMLWRTVSGIFAGGLTVVQMVYMVENIPRHHRMWIQNSITWSPNLIIFPY 228
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 29.1 bits (62), Expect = 2.8
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -3
Query: 646 LCSDFLKGYCERGTKCEYRH 587
+C +L+G C++G +CE+ H
Sbjct: 81 VCKHWLRGLCKKGDQCEFLH 100
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 646 LCSDFLKGYCERGTKCEYRH 587
+C ++L G+C +G C+Y H
Sbjct: 161 VCPNYLAGFCLQGPDCQYAH 180
>Z81105-5|CAB03218.2| 331|Caenorhabditis elegans Hypothetical
protein R05D7.5 protein.
Length = 331
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 519 FTFNNVICFVLINRFFVSLVIFTCLYSHFVPL 614
F+ N + CF L+ FV+ I+ C+ + F PL
Sbjct: 14 FSRNRLTCFCLLPASFVNRHIYVCIPNSFSPL 45
>Z74476-2|CAA98962.1| 200|Caenorhabditis elegans Hypothetical
protein W05B10.2 protein.
Length = 200
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 643 CSDFLKGYCERGTKCEYRH 587
C ++LKG C G KC + H
Sbjct: 139 CKNYLKGKCRFGDKCRFSH 157
>Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical
protein F38C2.7 protein.
Length = 203
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/40 (25%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 646 LCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITL 530
LC++F G+C+ G +C++ H ++ + + + + + IT+
Sbjct: 134 LCNNFSTTGHCKYGIRCQFIHRSMNSTSSNQSNKMENITI 173
>Z82267-3|CAB05191.1| 186|Caenorhabditis elegans Hypothetical
protein F38C2.5 protein.
Length = 186
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/21 (47%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = -3
Query: 646 LCSDFLK-GYCERGTKCEYRH 587
LC +F + G+C+ GTKC++ H
Sbjct: 120 LCDNFSRTGHCKYGTKCQFIH 140
>U40797-8|AAL08029.1| 332|Caenorhabditis elegans Serpentine
receptor, class u protein7 protein.
Length = 332
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 519 FTFNNV-ICFVLINRFFVSLVIFTCLYSHFVPLSQYPLRKS 638
FTFN + F L+ F+V I+ Y+ FV + QY +K+
Sbjct: 17 FTFNTFPVYFALLPLFYVIPTIYIVNYTIFVFMEQYTRKKT 57
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = -3
Query: 643 CSDFL-KGYCERGTKCEYRH 587
C DF +GYC RG +C Y H
Sbjct: 212 CKDFEERGYCIRGDQCPYYH 231
>AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical
protein Y60A9.3 protein.
Length = 203
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/40 (25%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 646 LCSDF-LKGYCERGTKCEYRHVNITNETKKRLMRTKQITL 530
LC+ F G+C+ G +C++ H ++ + + + T+ +T+
Sbjct: 134 LCNKFSTTGHCKYGIRCQFIHRSMDSTSSNQSNETENVTI 173
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -3
Query: 562 KRLMRTKQITLLKVKNQHTEKPNKNESVEESQNERN 455
+R+M K I L+ N+ E K+ SVEE Q E+N
Sbjct: 290 QRVMEVKFIATLQEDNKRYELLAKDASVEEKQLEKN 325
>AF045646-5|AAK29828.1| 225|Caenorhabditis elegans Hypothetical
protein F56B3.3 protein.
Length = 225
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 433 PDSICNPYFFHFDF--LQHFHSYLVFPYVDFLLLTMLFVLSSS 555
P S PYFF + F QH H L +DFL + F+ +S
Sbjct: 62 PGSARKPYFFLYIFHHHQHLHQLLHLELLDFLQKSDFFLFVNS 104
>AC024761-9|AAP13757.1| 279|Caenorhabditis elegans Hypothetical
protein Y38C1AA.12 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 559 RLMRTKQITLL-KVKNQHTEKPNKNESVEESQNERNMDCRYYRDIKPNFE 413
R + QI+ L KVK H + N + V E ++ R + R +K NFE
Sbjct: 197 RWLDAPQISALGKVKEAHEDVSNIHLQVYEIESARRKKRKQARSVKENFE 246
>Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical
protein Y57G11C.25 protein.
Length = 199
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 646 LCSDF-LKGYCERGTKCEYRH 587
LC +F G+C+ GTKC++ H
Sbjct: 116 LCDNFSTTGHCKYGTKCQFIH 136
>U46674-4|AAA85756.1| 574|Caenorhabditis elegans Hypothetical
protein T26A8.4 protein.
Length = 574
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 646 LCSDFLKGYCERGTKCEYRH 587
+C F +GYC G C Y H
Sbjct: 170 ICKFFREGYCRDGDNCLYSH 189
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 10 PFLLXVSCPSFLVCLSCPFSG 72
P L ++C FL+CLS FSG
Sbjct: 200 PLPLQIACIGFLLCLSALFSG 220
>AL032654-10|CAB63391.1| 819|Caenorhabditis elegans Hypothetical
protein Y52B11A.10 protein.
Length = 819
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 586 VNITNETKKRLMRTKQITLLKVKNQHTEKPNKNESVEESQNERNMD 449
+ +T E KK+ R +Q+ K + + NKN + +S +E +M+
Sbjct: 45 MGMTKEDKKKRKRKRQLEAKKEQRKLEYLQNKNRNDGDSDDEEDME 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,979,436
Number of Sequences: 27780
Number of extensions: 313928
Number of successful extensions: 1008
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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