Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_H07
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    24   0.93 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   6.5  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   6.5  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   6.5  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 397 KENGNRSKENNKTPRRGQLPRSV*PSTS 480
           +E+GN+ K+N +    G  PR   P  S
Sbjct: 207 EEHGNKKKKNKEDEDDGATPRKAPPQLS 234


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 397 KENGNRSKENNKTPRR 444
           K+NGNR  +N +   R
Sbjct: 504 KQNGNRQNDNKRNGNR 519



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 397 KENGNRSKENNKTPRR 444
           K+NGNR  +N +   R
Sbjct: 469 KQNGNRQNDNKQNGNR 484



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 397 KENGNRSKENNKTPRR 444
           K+NGNR  +N +   R
Sbjct: 479 KQNGNRQNDNKQNGNR 494


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 513 PSLIAQSVRPDACTRSNRPRQLPPAR 436
           P+ + +  +P+A   +NRP  +P  R
Sbjct: 28  PTRLRREAKPEAEPGNNRPVYIPQPR 53


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 513 PSLIAQSVRPDACTRSNRPRQLPPAR 436
           P+ + +  +P+A   +NRP  +P  R
Sbjct: 29  PARLRREAKPEAEPGNNRPIYIPQPR 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,826
Number of Sequences: 438
Number of extensions: 3070
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)