Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_H06
         (471 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0971 - 9781887-9781924,9782036-9782247,9782327-9784114,978...    27   7.6  
06_01_0867 - 6600847-6601413,6601954-6602181                           27   7.6  
02_05_0734 + 31318380-31318610,31319422-31319988                       27   7.6  

>12_01_0971 -
           9781887-9781924,9782036-9782247,9782327-9784114,
           9784630-9785432
          Length = 946

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +3

Query: 126 ID*CLSFEV-HISKISYLFQLIY 191
           +D C+S E  HI+ ++YLFQL Y
Sbjct: 574 LDGCMSLESQHINSLTYLFQLKY 596


>06_01_0867 - 6600847-6601413,6601954-6602181
          Length = 264

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 151 FIFLKYPIYFN*YIMVNPFLYLYIHEQHN 237
           F+   +  + + Y+ VN FLY ++H +H+
Sbjct: 103 FVMDTWQYFMHRYMHVNKFLYKHVHSKHH 131


>02_05_0734 + 31318380-31318610,31319422-31319988
          Length = 265

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +1

Query: 151 FIFLKYPIYFN*YIMVNPFLYLYIHEQHN 237
           F+   +  + + Y+ +N FLY +IH +H+
Sbjct: 104 FVMDTWQYFMHRYMHINKFLYKHIHSKHH 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,021,813
Number of Sequences: 37544
Number of extensions: 144210
Number of successful extensions: 171
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)