Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_H03
(533 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0392 + 17131839-17131943,17134182-17134258,17134385-171344... 86 1e-17
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 82 3e-16
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 81 4e-16
07_03_0945 - 22791754-22791863,22792295-22792367,22792457-227925... 80 1e-15
03_02_0377 - 7898075-7898605,7900782-7901000,7901079-7901142,790... 74 8e-14
08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316 71 6e-13
02_05_0743 + 31425827-31425888,31426733-31426759,31426840-314269... 70 1e-12
10_02_0078 - 4992019-4992594,4993156-4993248,4995984-4996202,499... 70 1e-12
06_01_0865 - 6571056-6571190,6571737-6571977,6572279-6572401,657... 68 4e-12
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 66 2e-11
09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416 64 9e-11
09_06_0070 - 20670387-20670473,20672418-20672645,20673388-206735... 61 5e-10
11_01_0354 + 2665570-2665601,2665796-2665894,2667158-2667202,266... 49 2e-06
12_01_0375 + 2930807-2930838,2930936-2930999,2931127-2931333,293... 33 0.14
08_02_0501 + 17836948-17837373,17837857-17839184,17839270-178393... 29 2.4
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 28 4.1
01_05_0148 + 18609853-18610058,18610347-18612669 28 4.1
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 28 5.4
12_02_0142 - 14306325-14306490,14306584-14306687,14306788-143069... 27 7.2
03_06_0651 + 35297560-35297895,35298881-35298991,35299670-352997... 27 7.2
01_03_0306 + 14875755-14876822 27 7.2
03_04_0085 - 17182662-17182963,17183044-17183101,17183564-171836... 27 9.5
>11_04_0392 +
17131839-17131943,17134182-17134258,17134385-17134411,
17134512-17134634,17134738-17134981,17135081-17135098
Length = 197
Score = 86.2 bits (204), Expect = 1e-17
Identities = 33/88 (37%), Positives = 57/88 (64%)
Frame = -1
Query: 467 SIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIF 288
++ +YP Y S++A+ESP K DD +WL YW++Y+ ++VE + ++ W P+++ LK +F
Sbjct: 63 TVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESLIYWIPIWYELKLLF 122
Query: 287 VIWCYLPTEYNGSLVIYYRIIRPYYQKH 204
+ W LP + G+ IY R +R +KH
Sbjct: 123 IAWLALP-NFRGAAFIYNRFVREQLRKH 149
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 81.8 bits (193), Expect = 3e-16
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = -1
Query: 464 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 285
+ YP Y S+KA+E+ DD +WLTYWV+Y+ ++ E I+ W P + +K IF+
Sbjct: 22 VALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQWLPFWPSMKLIFI 81
Query: 284 IWCYLPTEYNGSLVIYYRIIRPYYQKH 204
W LP +NG+ +Y +RP + KH
Sbjct: 82 CWLVLP-YFNGAAFVYQNYVRPMFVKH 107
>01_06_0575 - 30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 81.4 bits (192), Expect = 4e-16
Identities = 36/90 (40%), Positives = 55/90 (61%)
Frame = -1
Query: 479 LICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLL 300
L+ I +YP Y SM+A+ESP DD +WLTYWV+Y+ ++ E ++ WFPL+ +
Sbjct: 897 LVGPGIMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSLITLFELSCWKVLQWFPLWPYM 956
Query: 299 KCIFVIWCYLPTEYNGSLVIYYRIIRPYYQ 210
K +F W LP +NG+ IY +R Y++
Sbjct: 957 KLLFCCWLVLPI-FNGAAYIYETHVRRYFK 985
>07_03_0945 -
22791754-22791863,22792295-22792367,22792457-22792552,
22793268-22793331,22793957-22794008,22794525-22794622,
22795108-22795166,22795981-22796013
Length = 194
Score = 79.8 bits (188), Expect = 1e-15
Identities = 33/97 (34%), Positives = 55/97 (56%)
Frame = -1
Query: 467 SIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIF 288
+IG P Y + +A+E + + +WL YW Y FSI E F+D I+ P Y+ +K
Sbjct: 33 AIGVGLPVYSTFRAIEKKDQKEKERWLLYWAAYGSFSIAEIFADQILSSVPFYYHVKFAI 92
Query: 287 VIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMAN 177
++W P+ +G+ +Y R +RP++ KH +ID + N
Sbjct: 93 LVWLQFPSN-SGAKHVYRRYMRPFFLKHQAKIDRILN 128
>03_02_0377 -
7898075-7898605,7900782-7901000,7901079-7901142,
7901226-7901282,7901373-7901471,7901744-7901793,
7902378-7902422,7902967-7903062
Length = 386
Score = 73.7 bits (173), Expect = 8e-14
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Frame = -1
Query: 530 GLXAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFS 357
G F + L+ + + + G+ YPAY K +E P+ + W YW++ A +
Sbjct: 45 GPPLFYNVSLIMSRRSRCVLLAFGYAYPAYECYKTVELNKPEIEQLIFWCQYWILVALMT 104
Query: 356 IVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 189
++E F DF + W P Y K +F I+ + P + G+ IY RPY +H ID
Sbjct: 105 VMERFGDFTISWLPFYSEAKLMFFIYLWYP-KTKGTTYIYGTFFRPYISQHENEID 159
>08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316
Length = 127
Score = 70.9 bits (166), Expect = 6e-13
Identities = 26/77 (33%), Positives = 51/77 (66%)
Frame = -1
Query: 425 LESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSL 246
+ESP K DD +WL YW++Y+ +++E ++ ++ W P+++ +K +FV W LP ++ G+
Sbjct: 1 MESPTKVDDEQWLAYWILYSFITLLEMVAEPVLYWIPVWYPVKVLFVAWLVLP-QFKGAS 59
Query: 245 VIYYRIIRPYYQKHHGR 195
IY +++R +K+ R
Sbjct: 60 FIYKKLVREQLRKYRAR 76
>02_05_0743 +
31425827-31425888,31426733-31426759,31426840-31426962,
31427252-31427492,31427655-31427780
Length = 192
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = -1
Query: 464 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 285
+ YP Y S++A+E+ DD +WLTYWV+Y+ ++ E ++ W PL+ K F
Sbjct: 24 VSLAYPLYASVRAIETKSAVDDQQWLTYWVLYSFITLFELTFSPVLEWLPLWSYAKLFFN 83
Query: 284 IWCYLPTEYNGSLVIYYRIIRP 219
W LP +NG+ +Y +RP
Sbjct: 84 CWLVLP-YFNGAAHVYEHFVRP 104
>10_02_0078 -
4992019-4992594,4993156-4993248,4995984-4996202,
4996282-4996345,4996429-4996485,4996573-4996671,
4997296-4997327
Length = 379
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = -1
Query: 491 FGAELICNSIGFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWF 318
F + ++ + G+ YPAY K +E P+ + W YW++ A +++E F DF + W
Sbjct: 5 FLSRVLLLAFGYAYPAYECYKTVELNKPEIEKLIFWCQYWILVALLTVLERFGDFAISWL 64
Query: 317 PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 189
PLY K +F I+ + P G+ +Y RPY ++ ID
Sbjct: 65 PLYSEAKLMFFIYLWCP-RTKGTSYVYETFFRPYISQYENDID 106
>06_01_0865 -
6571056-6571190,6571737-6571977,6572279-6572401,
6572501-6572527,6573954-6574009
Length = 193
Score = 68.1 bits (159), Expect = 4e-12
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = -1
Query: 464 IGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFV 285
+ YP Y S++A+E+ DD +WLTYWV+Y+ ++ E ++ W P + K F
Sbjct: 22 VSLAYPLYASVRAIETKSPVDDQQWLTYWVLYSFITLFELTFAPVIEWLPFWSYAKLFFN 81
Query: 284 IWCYLPTEYNGSLVIYYRIIRPYY 213
W LP ++G+ +Y +RP +
Sbjct: 82 CWLVLPC-FHGAAYVYDHFVRPMF 104
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = -1
Query: 464 IGFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 291
+G+ YPAY K +E P+ + W YW++ A ++ E D V W P+Y K
Sbjct: 14 LGYAYPAYDCYKTVELNRPEVEQLRFWCQYWILLAVLTVFERVGDNFVSWLPMYSEAKLA 73
Query: 290 FVIWCYLP--TEYNGSLVIYYRIIRPYYQKHHGRID 189
F+++ + P + G+ +Y +PY KH ID
Sbjct: 74 FIVYLWYPKTQHFQGTSYVYESFFKPYIGKHEAEID 109
>09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416
Length = 98
Score = 63.7 bits (148), Expect = 9e-11
Identities = 25/80 (31%), Positives = 48/80 (60%)
Frame = -1
Query: 425 LESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSL 246
+ES K DD +WL YW++Y+ +++E ++ W PL++ K +FV W LP ++ G+
Sbjct: 1 MESTSKVDDEQWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLP-QFRGAS 59
Query: 245 VIYYRIIRPYYQKHHGRIDD 186
IY + +R +K+ ++ +
Sbjct: 60 FIYDKFVREQLKKNRVKLHE 79
>09_06_0070 -
20670387-20670473,20672418-20672645,20673388-20673508,
20673604-20673702,20673802-20673833
Length = 188
Score = 61.3 bits (142), Expect = 5e-10
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = -1
Query: 464 IGFVYPAYMSMKALE--SPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 291
+G+ YPAY K LE PQ D W YW++ A + +E + F V W P+Y K
Sbjct: 14 LGYAYPAYDCYKTLELNKPQIDQLRFWCQYWILLAFLTTLETITYFTVSWLPMYGEAKLA 73
Query: 290 FVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 189
V++ + P + G+ +Y ++P +H ID
Sbjct: 74 LVLYLWYP-KTRGAKHVYESYLQPVLARHEADID 106
>11_01_0354 +
2665570-2665601,2665796-2665894,2667158-2667202,
2667293-2667356,2667497-2667709,2669960-2670160
Length = 217
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/91 (28%), Positives = 43/91 (47%)
Frame = -1
Query: 461 GFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVI 282
G+ PA+ K LE+ + DD L +W Y + + V W P+Y +K F +
Sbjct: 15 GYAMPAFECFKTLET--RPDDAHMLRFWCQYWIIVSMVIACESFVSWMPMYGEIKLAFFV 72
Query: 281 WCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 189
+ + P + GS V+Y IRP ++ I+
Sbjct: 73 YLWYP-KTKGSDVVYDSFIRPTVMQYEPNIE 102
>12_01_0375 +
2930807-2930838,2930936-2930999,2931127-2931333,
2932385-2932458,2932831-2932858,2933268-2933456
Length = 197
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -1
Query: 332 IVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 189
++ W P+Y +K F ++ + P + GS V+Y +RP ++ I+
Sbjct: 8 LISWMPMYGEIKLAFFVYLWYP-KTKGSDVVYDTFLRPIVMQYEPNIE 54
>08_02_0501 + 17836948-17837373,17837857-17839184,17839270-17839380,
17839719-17839998,17840275-17840396,17840451-17840556,
17840814-17841020,17841130-17841255,17841719-17841817,
17842265-17842456,17842555-17843073
Length = 1171
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = -1
Query: 392 WLTYWVVYACFSIVEYFSDFIVGW-----FPLYWLLKCIFVIWCYLP 267
W T+ V+Y F S + V W PLYWL + V+ +P
Sbjct: 1095 WYTFLVIYGSFPPTISTSAYHVFWEACASSPLYWLSTLVIVVTALIP 1141
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 344 FSDFIVGWFPLYWLLKCIFVI 282
+S+ IV WFP++ CIFVI
Sbjct: 84 YSNGIVQWFPVFEYWSCIFVI 104
>01_05_0148 + 18609853-18610058,18610347-18612669
Length = 842
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 241 ITRDPLYSVGR*HQITKMHFNSQYNGNQ 324
+ DPL S+ R +T++HF YNG +
Sbjct: 714 LKEDPLPSLSRLLNLTELHFTRAYNGEK 741
>01_03_0303 + 14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 283 ITKMHFNSQYNGNQPTMKSEKYSTIE-KQAYTTQYVSHFVSSSFCGDS 423
+T M FN YNG QP + + K+A T Y S C DS
Sbjct: 1339 VTTMKFNETYNGQQPVVLDWAIGKVGCKEANMTSYACRSKHSE-CVDS 1385
>12_02_0142 -
14306325-14306490,14306584-14306687,14306788-14306967,
14307155-14307253,14307346-14307535,14307722-14307748,
14308190-14308506,14308532-14308675,14308799-14308905,
14309085-14309357,14309470-14309827
Length = 654
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = -1
Query: 494 GFGAELICNSIGFVYPAYMS-MKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWF 318
G +LICNS FV + + +K++ QK ++ + Y F+ S I +F
Sbjct: 470 GLTDKLICNSEKFVSESCVKWVKSINKEQKLPKLDLFSFNISYFFFA-----SHPIKLFF 524
Query: 317 PL----YWLLKCIFVIW 279
P+ +W+L CI ++W
Sbjct: 525 PIVRDKHWVLTCINLLW 541
>03_06_0651 +
35297560-35297895,35298881-35298991,35299670-35299744,
35300165-35300225,35300406-35300479,35300564-35300668,
35301099-35301206,35301604-35301707,35302005-35302223,
35302505-35302646,35302694-35302825,35302962-35303066
Length = 523
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -1
Query: 455 VYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWL 303
V Y+S + ++ PQ +D ++ VV ++ YF+ + LYWL
Sbjct: 276 VISQYVSSQVMQPPQNNDPSQQGAQAVVKFLPLLIGYFALSVPSGLSLYWL 326
>01_03_0306 + 14875755-14876822
Length = 355
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 283 ITKMHFNSQYNGNQPTMKSEKYSTI--EKQAYTTQYVSHFVSSSFCGDSR 426
IT M FN Y G QP + + E T Y H +S C DS+
Sbjct: 221 ITTMRFNDTYEGQQPLVLDWAIGDVSCEVAKNMTSYACH-SGNSICVDSK 269
>03_04_0085 -
17182662-17182963,17183044-17183101,17183564-17183638,
17183730-17183864,17183986-17184165,17184315-17184365,
17184537-17184637,17185562-17185620,17185701-17185816,
17186668-17186853,17187337-17187399,17187440-17187521,
17188221-17188312,17189153-17189296,17190056-17190136,
17190815-17190898,17191465-17191566,17191922-17192017,
17192239-17192299,17192418-17192521
Length = 723
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +1
Query: 346 YSTIEKQAYTTQYVSHFVSSSFCGDSRAFIDMYAGYTKPIELHINS 483
+ +++K T + S F G+ F D++AG + ++ H N+
Sbjct: 390 FRSLQKLLIDTATSEYLFSDDFFGEESLFNDIFAGPIQVVDEHFNA 435
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,818,098
Number of Sequences: 37544
Number of extensions: 323417
Number of successful extensions: 849
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -