Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_G20
         (484 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0186 + 21027581-21028825                                         30   1.1  
02_01_0714 + 5339408-5340020,5340117-5340319,5340408-5340605,534...    29   1.5  
04_03_0653 - 18429736-18431379                                         29   2.0  
06_03_0746 - 24111579-24112348,24113164-24113256,24113355-241134...    28   3.4  
06_03_0915 - 25929433-25930893                                         27   6.0  
03_05_0800 - 27815322-27815838,27817549-27817805                       27   7.9  

>11_06_0186 + 21027581-21028825
          Length = 414

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = +2

Query: 275 PIDAQEILLAIV-----VRPVVSISGWGTKFSTYWYFGATESEESFSIAVGDFIRPFAAV 439
           PI  ++I LA V     V+P+   SG   K+   WY G     +S SI   D +R F   
Sbjct: 110 PITGKQIALAPVTTIEQVKPIFDDSGAVHKYKYSWYTGQMTVSDSPSILAPDELRNFLFS 169

Query: 440 GLXIESQSVGTYKIV 484
              + S   G   IV
Sbjct: 170 KAIVSSDPSGGNFIV 184


>02_01_0714 +
           5339408-5340020,5340117-5340319,5340408-5340605,
           5340703-5340774,5341197-5341292,5341828-5341907,
           5341993-5342068,5342152-5342362,5342562-5342755,
           5342834-5342939,5343037-5343126,5343470-5344206
          Length = 891

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 323 VSISGWGTKFSTYWYFGATESEESFSIAVGDFI 421
           VS  GWGTK+ ++W    T   ESFS  +GD I
Sbjct: 498 VSYHGWGTKYDSFWCCYGT-GIESFS-KLGDSI 528


>04_03_0653 - 18429736-18431379
          Length = 547

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 19  RNSLISNHFNVPSARLNFYSLMTVFVLADTH 111
           R+  +SN F  P + L  Y+ +T  VL DTH
Sbjct: 207 RSLAVSNCFLPPPSELRHYAALTKLVLQDTH 237


>06_03_0746 -
           24111579-24112348,24113164-24113256,24113355-24113460,
           24113587-24113783,24113893-24114103,24114198-24114273,
           24114347-24114426,24114659-24114754,24114894-24114965,
           24115067-24115264,24115273-24115569
          Length = 731

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +2

Query: 323 VSISGWGTKFSTYWYFGATESEESFSIAVGDFI 421
           VS  GWGT+++++W    T   ESFS  +GD I
Sbjct: 325 VSYHGWGTQYNSFWCCYGT-GIESFS-KLGDSI 355


>06_03_0915 - 25929433-25930893
          Length = 486

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 268 EDAHRCTGNTSGNCCQTCSIYIRLGDQVLYLLVLRGNGIRGKLQH 402
           E  H+  G  +    Q C I    G  ++YL+++ G+ + G L+H
Sbjct: 139 EVVHKALGRPASIVAQMCVIINNAGVLIVYLIII-GDVMSGSLKH 182


>03_05_0800 - 27815322-27815838,27817549-27817805
          Length = 257

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 116 IQCVSANTKTVIKL*KLSLALGTLKWLEIRLFLKHI 9
           IQ      K + KL  L+L+L TL WL  R+F K +
Sbjct: 161 IQTKDMAAKRLAKLWVLTLSLATLCWLFDRMFCKKL 196


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,878,869
Number of Sequences: 37544
Number of extensions: 256807
Number of successful extensions: 618
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)