Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_G20
(484 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 41 4e-04
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 41 4e-04
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 33 0.11
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 31 0.33
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 31 0.33
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical... 29 2.3
AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical... 29 2.3
Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical pr... 28 4.1
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 28 4.1
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 27 5.4
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 27 5.4
Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical pr... 27 7.1
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 27 7.1
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 27 7.1
U80840-5|AAB37930.1| 353|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/98 (25%), Positives = 41/98 (41%)
Frame = -1
Query: 472 CPDGLAFNXETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQKY 293
C LAFN T +C++P +V+ C+ C E + NNC+ +
Sbjct: 1213 CQSSLAFNQLTGKCDYPQKVSGCENHGQTNGECSEHG-----------SFIADANNCEVF 1261
Query: 292 FLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGACPAE 179
+ C+ G V+ C + F+ L S C V +C +
Sbjct: 1262 YRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQ 1299
Score = 39.1 bits (87), Expect = 0.002
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 23/118 (19%)
Frame = -1
Query: 472 CPDGLAFNXETYRCEWPDEVADCDAEA-----------------FLGFRCPEVPISRELG 344
C + L FN T C + DEV +C ++ + G +VP + +
Sbjct: 721 CGESLYFNEATQECTYRDEVPECGSQGSTSSPVITTPGQDQSSNYYGIPSDDVPSTTQT- 779
Query: 343 PPAGYR--YYRS---DNNC-QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 188
P G R Y S D C QKY C D V C G FD+ + +C DEV C
Sbjct: 780 -PVGDRCAYVASGLFDLGCSQKYIQCSDSAASVRECEGSLYFDERSQSCRFRDEVFKC 836
Score = 33.1 bits (72), Expect = 0.11
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 301 QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGACPAE 179
QKY C +G V CG F++ T C DEV C ++
Sbjct: 706 QKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 31.9 bits (69), Expect = 0.25
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 472 CPDGLAFNXETYRCEWPDEVADCDAEA 392
CP G FN C+WP V C +A
Sbjct: 1274 CPSGTVFNPLLSVCDWPSAVPSCSGQA 1300
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 41.1 bits (92), Expect = 4e-04
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Frame = -1
Query: 472 CPDGLAFNXETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQKY 293
CP L FN C+WP +VA+C G P+ P E G Y S C
Sbjct: 277 CPASLVFNPTILVCDWPRDVAEC-----AGLPTPQ-PTCEEDG-------YFSFGQCSSS 323
Query: 292 F-LCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 188
F C +G V++C F + T C V C
Sbjct: 324 FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 28.7 bits (61), Expect = 2.3
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 2/99 (2%)
Frame = -1
Query: 478 FVCPDGLAFNXETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQ 299
F CP L FN ++ C++P C E + E PI+ G SD C
Sbjct: 430 FECPSSLVFNDQSLICDYPQTSLKCLIEDTI--LIDETPIAAFDCSTDG---LFSDGLCS 484
Query: 298 -KYFLCIDGHPRVLYCGGESA-FDDLTSTCVSADEVGAC 188
Y C G C +A F + CV + + C
Sbjct: 485 ATYHQCTAGQLINFTCAASNAVFSAANTECVDSSTLLQC 523
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 41.1 bits (92), Expect = 4e-04
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Frame = -1
Query: 472 CPDGLAFNXETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQKY 293
CP L FN C+WP +VA+C G P+ P E G Y S C
Sbjct: 277 CPASLVFNPTILVCDWPRDVAEC-----AGLPTPQ-PTCEEDG-------YFSFGQCSSS 323
Query: 292 F-LCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 188
F C +G V++C F + T C V C
Sbjct: 324 FTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 28.7 bits (61), Expect = 2.3
Identities = 26/99 (26%), Positives = 36/99 (36%), Gaps = 2/99 (2%)
Frame = -1
Query: 478 FVCPDGLAFNXETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQ 299
F CP L FN ++ C++P C E + E PI+ G SD C
Sbjct: 430 FECPSSLVFNDQSLICDYPQTSLKCLIEDTI--LIDETPIAAFDCSTDG---LFSDGLCS 484
Query: 298 -KYFLCIDGHPRVLYCGGESA-FDDLTSTCVSADEVGAC 188
Y C G C +A F + CV + + C
Sbjct: 485 ATYHQCTAGQLINFTCAASNAVFSAANTECVDSSTLLQC 523
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 40.3 bits (90), Expect = 7e-04
Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Frame = -1
Query: 472 CPDGLAFNXETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQKY 293
CP L FN C+WP V DC ++ C EV Y S C
Sbjct: 207 CPANLVFNPAISSCDWPKNVMDCSEKSEKPQNCGEVD------------GYFSFGRCSSS 254
Query: 292 F-LCIDGHPRVLYCGGESAFDDLTSTCVSADEVGACPAE 179
F C +G P V++C F + C V C E
Sbjct: 255 FSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLE 293
Score = 32.3 bits (70), Expect = 0.19
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -1
Query: 472 CPDGLAFNXETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQKY 293
CPDGL F+ + C++ V +CD E+ GF S L P +C
Sbjct: 268 CPDGLMFSEKNQMCDYEWNVDECDLES-SGF-MENYKASEALTPCTNMDNGLYALDCTPR 325
Query: 292 FL-CIDGHPRVLYCGGESAFDDLTSTC 215
L C +G + C F++ + C
Sbjct: 326 VLSCQNGRENIFECPPSLVFNENSLIC 352
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 478 FVCPDGLAFNXETYRCEWPDEVADCDAEAFLGFR 377
F CP L FN + C++P+ C E L R
Sbjct: 337 FECPPSLVFNENSLICDYPETSLKCCMEDALLIR 370
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 33.1 bits (72), Expect = 0.11
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -1
Query: 484 YDFVCPDGLAFNXETYRCEWPD 419
Y+F CP+GL+F+ +T C+ PD
Sbjct: 590 YNFECPNGLSFHADTMMCDRPD 611
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 31.5 bits (68), Expect = 0.33
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 478 FVCPDGLAFNXETYRCEWPDEVADC 404
F+C +GL F+ E RC D++A+C
Sbjct: 128 FICENGLFFSPEQARCAPADQIAEC 152
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 31.5 bits (68), Expect = 0.33
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 478 FVCPDGLAFNXETYRCEWPDEVADC 404
F+C +GL F+ E RC D++A+C
Sbjct: 552 FICENGLFFSPEQARCAPADQIAEC 576
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/38 (26%), Positives = 16/38 (42%)
Frame = -1
Query: 301 QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 188
Q Y C++G + C F + C AD++ C
Sbjct: 539 QHYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 31.5 bits (68), Expect = 0.33
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 478 FVCPDGLAFNXETYRCEWPDEVADC 404
F+C +GL F+ E RC D++A+C
Sbjct: 552 FICENGLFFSPEQARCAPADQIAEC 576
Score = 27.1 bits (57), Expect = 7.1
Identities = 10/38 (26%), Positives = 16/38 (42%)
Frame = -1
Query: 301 QKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 188
Q Y C++G + C F + C AD++ C
Sbjct: 539 QHYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAEC 576
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -1
Query: 310 NNCQKYFLCIDGHPRVLYCGGESAFDDLTSTCVSADE---VGACPAE 179
N+C K+ CID HP +C F C DE G C E
Sbjct: 1865 NDCNKHAECIDIHPDSHFCSCPDGFIGDGMICDDVDECNNAGMCDDE 1911
>AL132876-29|CAF31497.1| 840|Caenorhabditis elegans Hypothetical
protein Y105E8A.7b protein.
Length = 840
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 307 NCQKYFLCIDGHPRVLYCGGESAF 236
+CQK + +DG PR YCG + F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713
>AL132876-27|CAD21658.1| 906|Caenorhabditis elegans Hypothetical
protein Y105E8A.7a protein.
Length = 906
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 307 NCQKYFLCIDGHPRVLYCGGESAF 236
+CQK + +DG PR YCG + F
Sbjct: 690 SCQKAVIRVDGGPRSEYCGTKREF 713
>Z46343-7|CAE17971.2| 187|Caenorhabditis elegans Hypothetical
protein T23F11.6 protein.
Length = 187
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 388 LGFRCPEVPISRELGPPAGYRYYRSDNNCQKYFLC 284
L + CP S L PP +R + N+CQ ++C
Sbjct: 22 LSYACPPSLDSLNLPPPVIHRECLTRNSCQNGYIC 56
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -1
Query: 436 RCEWPDEVADCDAEAFLGFRCPEVPISRELG--PPA 335
RCE DEV D E G R + I+R LG PPA
Sbjct: 108 RCEEFDEVTDISKEYSTGTRKTKANIARALGLEPPA 143
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 271 DAHRCTGNTSGNCCQTCSIYIRLGDQVLYLLVLRGNGIRGKLQHRSRRLHQAIRS 435
D +C T C TC+I + G Q++ L + +R Q S H A +S
Sbjct: 184 DCSQCE-ETGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQS 237
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 271 DAHRCTGNTSGNCCQTCSIYIRLGDQVLYLLVLRGNGIRGKLQHRSRRLHQAIRS 435
D +C T C TC+I + G Q++ L + +R Q S H A +S
Sbjct: 184 DCSQCE-ETGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQS 237
>Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical
protein C27C12.2 protein.
Length = 461
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 243 PHSTI*PQHVSPPMK*EHVLLS*GPQQSVPRTTQSNCSPKKSNSM 109
P T P H+ ++ EH + P +PR ++N S + SM
Sbjct: 240 PRKTSEPSHLGSSLQNEHPQSNSRPSTVIPRVQRTNTSASLTRSM 284
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 174 GPQQSVPRTTQSNCSPKKSNSMRIS*HENRH*AIEIKSCTWH 49
GP PRT+ S CS K + I ++ R +E+KS H
Sbjct: 95 GPPVDAPRTSSSCCSNKTNRDEMID-NKFRELLVEVKSSLIH 135
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.1 bits (57), Expect = 7.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 472 CPDGLAFNXETYRCEWPDEVADC 404
CP GL ++ RC++ + V DC
Sbjct: 817 CPAGLFYSKLNNRCDYKEHVEDC 839
Score = 26.6 bits (56), Expect = 9.4
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 304 CQK-YFLCIDGHPRVLYCGGESAFDDLTSTCVSAD 203
C K +F C DG C G+ F+ T TC A+
Sbjct: 446 CTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAE 480
Score = 26.6 bits (56), Expect = 9.4
Identities = 23/95 (24%), Positives = 32/95 (33%)
Frame = -1
Query: 472 CPDGLAFNXETYRCEWPDEVADCDAEAFLGFRCPEVPISRELGPPAGYRYYRSDNNCQKY 293
C GL +N + C + V C +G + + G GY S Y
Sbjct: 919 CAPGLFYNEKNGMCAYKHTVDTCK----IGKGSDIIDSNACFGKSDGYY---SAGCSSYY 971
Query: 292 FLCIDGHPRVLYCGGESAFDDLTSTCVSADEVGAC 188
F CID R + C F + CV + C
Sbjct: 972 FSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKEC 1006
>U80840-5|AAB37930.1| 353|Caenorhabditis elegans Hypothetical
protein F08D12.10 protein.
Length = 353
Score = 26.6 bits (56), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 110 CVSANTKTVIKL*KLSLALGTLKWLEIRLFLKH 12
C++ N V KL + TLK E+ +FLKH
Sbjct: 240 CITLNDLLVSNCTKLIITDSTLKSEELNIFLKH 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,618,472
Number of Sequences: 27780
Number of extensions: 211130
Number of successful extensions: 580
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -