Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_G19
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   259   1e-71
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   258   4e-71
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   170   8e-45
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  259 bits (635), Expect = 1e-71
 Identities = 109/137 (79%), Positives = 126/137 (91%)
 Frame = -2

Query: 655 FGRLXRHNFNRHYTTNRAPLGFHFHASWLKSKKEYRDELIKFIEEMLEKNDVYFTSLIQV 476
           F RL RHNFNRH  +NRAPLG HFHASWLKSKKE+++ELIKFIEEML++NDVYF + +QV
Sbjct: 393 FARLLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQRNDVYFVTNLQV 452

Query: 475 IQWMQNPTELSSLRDFQEWKQDKCDVKGQPFCSLPNACPLTTRELPGETLRLFTCMECPN 296
           IQWMQNPTEL+ LRDFQEWK +KCD+KGQP+CSLPN+C LTTRELPGETLRLFTCMECPN
Sbjct: 453 IQWMQNPTELNGLRDFQEWK-EKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPN 511

Query: 295 NYPWILDPQGEGYNVKK 245
           NYPWILDP G+G++V+K
Sbjct: 512 NYPWILDPTGDGFSVRK 528


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  258 bits (631), Expect = 4e-71
 Identities = 108/137 (78%), Positives = 126/137 (91%)
 Frame = -2

Query: 655 FGRLXRHNFNRHYTTNRAPLGFHFHASWLKSKKEYRDELIKFIEEMLEKNDVYFTSLIQV 476
           F RL RHNFNRH  +NRAPLG HFHASWLKSKKE+++ELIKFIEEML++NDVYF + +QV
Sbjct: 400 FARLLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEEMLQRNDVYFVTNLQV 459

Query: 475 IQWMQNPTELSSLRDFQEWKQDKCDVKGQPFCSLPNACPLTTRELPGETLRLFTCMECPN 296
           IQWMQNPTEL+ LRDFQEWK +KCD+KGQP+CSLPN+C LTTRELPGETLRLFTCMECPN
Sbjct: 460 IQWMQNPTELNGLRDFQEWK-EKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPN 518

Query: 295 NYPWILDPQGEGYNVKK 245
           NYPWIL+P G+G++V+K
Sbjct: 519 NYPWILEPTGDGFSVRK 535


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  170 bits (414), Expect = 8e-45
 Identities = 67/134 (50%), Positives = 99/134 (73%), Gaps = 1/134 (0%)
 Frame = -2

Query: 655 FGRLXRHNFNRHYTTNRAPLGFHFHASWLKSKKEYRDELIKFIEEMLEK-NDVYFTSLIQ 479
           F     HNF+RHY  NRAPLG +FHA+WLK+  E+ D  + +++E+L   NDVYF ++ Q
Sbjct: 401 FYNFLNHNFDRHYEENRAPLGLYFHAAWLKNNPEFLDAFLYWVDEILANHNDVYFVTMTQ 460

Query: 478 VIQWMQNPTELSSLRDFQEWKQDKCDVKGQPFCSLPNACPLTTRELPGETLRLFTCMECP 299
           VIQW+QNP  ++  ++F+ W++ KC V+G P C +P++C LT++E+PGET+ L TC+ CP
Sbjct: 461 VIQWIQNPRTITESKNFEPWRE-KCVVEGNPHCWVPHSCKLTSKEVPGETINLQTCVRCP 519

Query: 298 NNYPWILDPQGEGY 257
           NNYPW+ DP G+G+
Sbjct: 520 NNYPWVNDPTGDGF 533


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 215 YTCK*ILNNFINNYIATCNIILS 147
           +T K  +NN  NN + TC I L+
Sbjct: 482 FTYKITVNNSGNNRMGTCRIFLA 504


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 396 LTSH--LSCFHSWKSRSDDNSVGFC 464
           L SH  +   + W S++ DNS  FC
Sbjct: 185 LLSHAPIDSANQWYSQTIDNSYQFC 209


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 396 LTSH--LSCFHSWKSRSDDNSVGFC 464
           L SH  +   + W S++ DNS  FC
Sbjct: 176 LLSHAPIDSANQWYSQTIDNSYQFC 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,409
Number of Sequences: 336
Number of extensions: 3396
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)