Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_G19
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 75 6e-14
U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical p... 53 2e-07
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 53 2e-07
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl ... 33 0.24
AF000263-6|AAO21394.1| 496|Caenorhabditis elegans Phenylalanyl ... 31 0.95
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 30 1.7
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 30 1.7
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z66567-6|CAA91490.2| 281|Caenorhabditis elegans Hypothetical pr... 29 3.8
U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying defe... 29 3.8
U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying defe... 29 3.8
U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying defe... 29 3.8
U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying defe... 29 3.8
U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying defe... 29 3.8
AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical ... 29 3.8
AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical ... 29 3.8
U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69384-9|CAD89747.1| 497|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69383-14|CAA93405.3| 497|Caenorhabditis elegans Hypothetical p... 27 8.9
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 74.5 bits (175), Expect = 6e-14
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 10/133 (7%)
Frame = -2
Query: 634 NFNRHYTTNRAPLGFHFHASWLK--SKKEYRDELIKFIEEMLEKNDVYFTSLIQVIQWMQ 461
NF R Y+ NRAP +A +L+ + + KF+ M + DVY ++ Q+I WM+
Sbjct: 1741 NFERSYSANRAPYVLSLNADFLQLGGHNKGMKAVQKFLNRMSAQKDVYIVTIKQLIDWMK 1800
Query: 460 NPTELSSLRDFQ-EWKQDKCDVK-------GQPFCSLPNACPLTTRELPGETLRLFTCME 305
P +S ++ + + K C + C +PN C +T L + + TC+
Sbjct: 1801 RPVPISEMKSVRGKSKAVGCPITLSFNRNPSLSTCDIPNKCLYSTPSLSSQEHQFLTCLP 1860
Query: 304 CPNNYPWILDPQG 266
CP YPW+ +P G
Sbjct: 1861 CPTMYPWLENPAG 1873
>U28735-11|AAM69114.1| 358|Caenorhabditis elegans Hypothetical
protein F48E3.8c protein.
Length = 358
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = -2
Query: 532 FIEEMLEKNDVYFTSLIQVIQWMQNPTELSSLRDFQEWKQDKCDVKGQPF-CSLPNACPL 356
F++ +++K DV+ + Q+I +M+NP +L++++ + W Q K +K + C P C
Sbjct: 275 FLKFIVQKQDVFVVTGSQIIDYMRNPVDLNNIKSLRSW-QCKPQMKDEANPCENPTTCSF 333
Query: 355 TTRELPGETLRLF-TCMECPNNYPWI 281
+ R G+ F C CP +YPWI
Sbjct: 334 SGR-ARGQFAHSFRMCGVCPKSYPWI 358
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = -2
Query: 532 FIEEMLEKNDVYFTSLIQVIQWMQNPTELSSLRDFQEWKQDKCDVKGQPF-CSLPNACPL 356
F++ +++K DV+ + Q+I +M+NP +L++++ + W Q K +K + C P C
Sbjct: 2344 FLKFIVQKQDVFVVTGSQIIDYMRNPVDLNNIKSLRSW-QCKPQMKDEANPCENPTTCSF 2402
Query: 355 TTRELPGETLRLF-TCMECPNNYPWI 281
+ R G+ F C CP +YPWI
Sbjct: 2403 SGR-ARGQFAHSFRMCGVCPKSYPWI 2427
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical protein
F48E3.8b protein.
Length = 1299
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = -2
Query: 532 FIEEMLEKNDVYFTSLIQVIQWMQNPTELSSLRDFQEWKQDKCDVKGQPF-CSLPNACPL 356
F++ +++K DV+ + Q+I +M+NP +L++++ + W Q K +K + C P C
Sbjct: 1216 FLKFIVQKQDVFVVTGSQIIDYMRNPVDLNNIKSLRSW-QCKPQMKDEANPCENPTTCSF 1274
Query: 355 TTRELPGETLRLF-TCMECPNNYPWI 281
+ R G+ F C CP +YPWI
Sbjct: 1275 SGR-ARGQFAHSFRMCGVCPKSYPWI 1299
>AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl (f)
trna synthetaseprotein 1, isoform a protein.
Length = 552
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -2
Query: 523 EMLEKNDVYFTSLI--QVIQWMQNPTELSSLRDFQEWKQDKCDVKGQPFCSLPNACPLTT 350
EM + DV T + Q++ ++Q E +S++ Q+W D V G L N LTT
Sbjct: 56 EMTAETDVRSTENLPQQILDFLQESNEFNSIQLAQQWNLDHQKVIGAIKSLLANEGVLTT 115
Query: 349 RELPGETLRL 320
+++ + L L
Sbjct: 116 KDVTEKRLEL 125
>AF000263-6|AAO21394.1| 496|Caenorhabditis elegans Phenylalanyl (f)
trna synthetaseprotein 1, isoform b protein.
Length = 496
Score = 30.7 bits (66), Expect = 0.95
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -2
Query: 520 MLEKNDVYFTSLI--QVIQWMQNPTELSSLRDFQEWKQDKCDVKGQPFCSLPNACPLTTR 347
M + DV T + Q++ ++Q E +S++ Q+W D V G L N LTT+
Sbjct: 1 MTAETDVRSTENLPQQILDFLQESNEFNSIQLAQQWNLDHQKVIGAIKSLLANEGVLTTK 60
Query: 346 ELPGETLRL 320
++ + L L
Sbjct: 61 DVTEKRLEL 69
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 72 CMYCNHRIFK*LSGKIILERTLNLRRQNNITCCN 173
C+ CNH++ K ++ + +E+ N+R N CCN
Sbjct: 338 CVLCNHQMPKTVTVQEHMEKEHNIRLVFNCRCCN 371
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 72 CMYCNHRIFK*LSGKIILERTLNLRRQNNITCCN 173
C+ CNH++ K ++ + +E+ N+R N CCN
Sbjct: 338 CVLCNHQMPKTVTVQEHMEKEHNIRLVFNCRCCN 371
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 391 QPFCSLPNACPLTTRELPGETLRLFTCMECPNNYPWILDPQ 269
QP P C T E+ T+ + P +YP +LDPQ
Sbjct: 289 QPTEGCPTNCRNTCNEVCAPTVASQPSTQAPQSYPVLLDPQ 329
>Z66567-6|CAA91490.2| 281|Caenorhabditis elegans Hypothetical
protein ZK455.5 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 613 TNRAPL--GFHFHASWLKSKKEYRDELIKFIEEMLEKNDVYFTSLIQV 476
+++ PL G ++HA S K Y ++L K I ++ Y TSL +V
Sbjct: 187 SDKGPLIAGGYYHAKPTSSSKNYFNKLAKDISWWYAPDNAYMTSLCEV 234
>U29537-6|AAO38648.1| 340|Caenorhabditis elegans Egg laying
defective protein 44,isoform d protein.
Length = 340
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 652 GRLXRHNFNRHYTTNRAPLG-FHFHASWLK-SKKEYRDELIKFIEEMLEKNDV 500
G L ++ ++ N P FH ++++K +K R EL+K IE LEK+D+
Sbjct: 118 GLLSEWIYHNLFSNNPLPTKQFHLFSAYVKCNKTSLRTELVK-IENTLEKDDI 169
>U29537-5|AAO38650.1| 414|Caenorhabditis elegans Egg laying
defective protein 44,isoform f protein.
Length = 414
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 652 GRLXRHNFNRHYTTNRAPLG-FHFHASWLK-SKKEYRDELIKFIEEMLEKNDV 500
G L ++ ++ N P FH ++++K +K R EL+K IE LEK+D+
Sbjct: 192 GLLSEWIYHNLFSNNPLPTKQFHLFSAYVKCNKTSLRTELVK-IENTLEKDDI 243
>U29537-4|AAO38647.1| 450|Caenorhabditis elegans Egg laying
defective protein 44,isoform c protein.
Length = 450
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 652 GRLXRHNFNRHYTTNRAPLG-FHFHASWLK-SKKEYRDELIKFIEEMLEKNDV 500
G L ++ ++ N P FH ++++K +K R EL+K IE LEK+D+
Sbjct: 228 GLLSEWIYHNLFSNNPLPTKQFHLFSAYVKCNKTSLRTELVK-IENTLEKDDI 279
>U29537-3|AAO38646.1| 457|Caenorhabditis elegans Egg laying
defective protein 44,isoform b protein.
Length = 457
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 652 GRLXRHNFNRHYTTNRAPLG-FHFHASWLK-SKKEYRDELIKFIEEMLEKNDV 500
G L ++ ++ N P FH ++++K +K R EL+K IE LEK+D+
Sbjct: 235 GLLSEWIYHNLFSNNPLPTKQFHLFSAYVKCNKTSLRTELVK-IENTLEKDDI 286
>U29537-2|AAK31508.1| 465|Caenorhabditis elegans Egg laying
defective protein 44,isoform a protein.
Length = 465
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 652 GRLXRHNFNRHYTTNRAPLG-FHFHASWLK-SKKEYRDELIKFIEEMLEKNDV 500
G L ++ ++ N P FH ++++K +K R EL+K IE LEK+D+
Sbjct: 243 GLLSEWIYHNLFSNNPLPTKQFHLFSAYVKCNKTSLRTELVK-IENTLEKDDI 294
>AF068721-7|AAC19264.1| 531|Caenorhabditis elegans Hypothetical
protein ZK1055.6a protein.
Length = 531
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -3
Query: 588 TSTPPGLNLKKNTEMN*SSLSKKCWKRTMYTSLH*FRLFNGC-KTLPNY-HHSVTSKNGN 415
T PP + + KNT +++K T+ + ++ G + +P+ H SV SKN +
Sbjct: 294 TMAPPPMEVTKNTLSTEFRIARKA---TILNGVDDHKVTIGTIELIPSLLHQSVPSKNAS 350
Query: 414 KINVTSKVNLSVL 376
+ S VN SVL
Sbjct: 351 ALLTASAVNTSVL 363
>AF068721-6|AAL00880.1| 564|Caenorhabditis elegans Hypothetical
protein ZK1055.6b protein.
Length = 564
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -3
Query: 588 TSTPPGLNLKKNTEMN*SSLSKKCWKRTMYTSLH*FRLFNGC-KTLPNY-HHSVTSKNGN 415
T PP + + KNT +++K T+ + ++ G + +P+ H SV SKN +
Sbjct: 327 TMAPPPMEVTKNTLSTEFRIARKA---TILNGVDDHKVTIGTIELIPSLLHQSVPSKNAS 383
Query: 414 KINVTSKVNLSVL 376
+ S VN SVL
Sbjct: 384 ALLTASAVNTSVL 396
>U00055-3|AAA50723.3| 693|Caenorhabditis elegans Hypothetical
protein R02F2.7 protein.
Length = 693
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -2
Query: 568 KSKKEYRDELIKFIEEMLEKNDVYFTSLIQVIQWMQNPTELSSL 437
++KKE D ++KF+EE+ + L ++I M ++L SL
Sbjct: 466 ETKKEVFDSVVKFVEEIPGAESIDEMKLFKLIIEMYGGSQLESL 509
>Z92822-4|CAD18893.2| 791|Caenorhabditis elegans Hypothetical
protein ZK520.4c protein.
Length = 791
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 443 ITP*LPRMETR*M*RQRSTFLFSAERLSTNN*RVTRRDITSFHL 312
+ P + + T+ M Q ++ +A +LSTN+ T +D+ +FHL
Sbjct: 534 VQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHL 577
>Z92822-3|CAB07302.3| 774|Caenorhabditis elegans Hypothetical
protein ZK520.4b protein.
Length = 774
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 443 ITP*LPRMETR*M*RQRSTFLFSAERLSTNN*RVTRRDITSFHL 312
+ P + + T+ M Q ++ +A +LSTN+ T +D+ +FHL
Sbjct: 517 VQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHL 560
>Z92822-2|CAB70188.2| 850|Caenorhabditis elegans Hypothetical
protein ZK520.4a protein.
Length = 850
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 443 ITP*LPRMETR*M*RQRSTFLFSAERLSTNN*RVTRRDITSFHL 312
+ P + + T+ M Q ++ +A +LSTN+ T +D+ +FHL
Sbjct: 593 VQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHL 636
>Z69384-9|CAD89747.1| 497|Caenorhabditis elegans Hypothetical
protein F13E9.1 protein.
Length = 497
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 577 SWLKSKKEYRDELIKFIEEMLEKNDVYFTSLIQVIQWMQNPTELSSL 437
S+L KK ++ ++FIEE + + Y +L+++ W Q + SL
Sbjct: 69 SFLPPKKRLGNKDLEFIEERRLELEKYVRALLELEVWYQKQKNVHSL 115
>Z69383-14|CAA93405.3| 497|Caenorhabditis elegans Hypothetical
protein F13E9.1 protein.
Length = 497
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -2
Query: 577 SWLKSKKEYRDELIKFIEEMLEKNDVYFTSLIQVIQWMQNPTELSSL 437
S+L KK ++ ++FIEE + + Y +L+++ W Q + SL
Sbjct: 69 SFLPPKKRLGNKDLEFIEERRLELEKYVRALLELEVWYQKQKNVHSL 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,671,373
Number of Sequences: 27780
Number of extensions: 300544
Number of successful extensions: 869
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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