Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_G17
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    26   1.0  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   2.4  
AJ697719-1|CAG26912.1|  174|Anopheles gambiae putative odorant-b...    23   7.2  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 344 RFNTFLAFSMYCVETLVRRVLFD-RDILVLIRG 249
           R+  +L FS +C   ++ +VLF   D+ V +RG
Sbjct: 52  RYRFYLIFSYFCAMVVLPKVLFGYPDLEVAVRG 84


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 350 RFRFNTFLAFSMYCVETLVRRVLFD-RDILVLIRG 249
           R+R+   LAF  +C+  ++ +V F   D+  ++RG
Sbjct: 30  RYRYKFRLAFLSFCLLVVIPKVAFGYPDLETMVRG 64


>AJ697719-1|CAG26912.1|  174|Anopheles gambiae putative
           odorant-binding protein OBPjj9 protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 650 FILGFRVPENNLHGCXIINN 709
           F L   VPE  + GC ++NN
Sbjct: 22  FALQATVPEGTVAGCSMLNN 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,763
Number of Sequences: 2352
Number of extensions: 11201
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)