Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_G15
(430 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 33 0.019
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.31
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 28 0.53
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 28 0.71
SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1 ... 27 0.93
SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces pombe... 27 0.93
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 27 1.6
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 26 2.9
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 26 2.9
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 25 5.0
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||... 25 5.0
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 25 5.0
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 25 5.0
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 25 5.0
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 25 5.0
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 25 6.6
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 25 6.6
SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 24 8.7
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 24 8.7
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 33.1 bits (72), Expect = 0.019
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -3
Query: 218 KEAKLQEIEAKEKVIRDA---KLKEEKERASALEIKALEEMASGTAKK*KD 75
KE KLQ+ A+E+ IR +LK EKER + K L E AKK K+
Sbjct: 76 KEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKE 126
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.31
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 236 QNRLSKKEAKLQEIEAKEKVIRDAKLKEEKERASALEIKALEEM 105
Q KK K Q+ +EK+ R+ +L+EE+E+ E K E++
Sbjct: 668 QKEREKKLKKQQQEADREKMAREQRLREEEEKRILEERKRREKL 711
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 28.3 bits (60), Expect = 0.53
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -3
Query: 254 LYGAFHQNRLSKKEAKLQEIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 87
L A+++ KK+ KE V+ + K+ A LE + E+M S AK
Sbjct: 305 LESAYNEELEMKKDTSKPTASTKEVVVEKKPDESRKQAARTLETVSEEQMGSSNAK 360
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 27.9 bits (59), Expect = 0.71
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 236 QNRLSKKEAKLQ-EIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDK 72
Q + +K K + E A+E K KEE+ER +A E A A+ K +DK
Sbjct: 291 QEKAAKAARKWEREAGAREAAAAAQKKKEEEERRAAEEAAAKASAAAANKKAKEDK 346
>SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 27.5 bits (58), Expect = 0.93
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -3
Query: 242 FHQNRLSKKEAKLQEIEAKEKVIRDAKLKEEKERASALEI-KALEE 108
+H R S+K+A L + + + + ++ K+R +LE+ KAL++
Sbjct: 446 YHMKRRSRKDAPLLKSQLLMDSLENLPVRASKDRVRSLEVAKALQD 491
>SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 342
Score = 27.5 bits (58), Expect = 0.93
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 239 HQNRLSKKEAKLQEIEAKEKVIRDAKLKEEKERASALEIKALEE 108
H N+ KKEAK + + + L +K++ E+K+L+E
Sbjct: 299 HLNKFEKKEAKKDRKKKSKDGDQTTLLLRKKQKLGNAEVKSLDE 342
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 26.6 bits (56), Expect = 1.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -3
Query: 242 FHQNRLSKKEAKLQEIEAKEK 180
FHQ +L++++AK+Q+ AK K
Sbjct: 270 FHQRQLAREQAKIQQWIAKRK 290
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.8 bits (54), Expect = 2.9
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +1
Query: 196 ISCSFASFFDSLFWWKAPYRTPTVRKDQRPNLIRGDI 306
+ C ++D+ K+P+ P + Q N +RGD+
Sbjct: 918 LECMLKEYYDTFL--KSPFAVPNAVQAQLHNQVRGDL 952
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 25.8 bits (54), Expect = 2.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 392 FQKVSYKNCFTV*QLYNKMSDLPYGAPVRISP 297
F + + K CF + Y K D+P G +R P
Sbjct: 175 FIETNEKLCFDRSKAYGKRLDIPSGTAIRFEP 206
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 25.0 bits (52), Expect = 5.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 237 PEQAIKERSETTRD*SQREGHPRCQAEGGERKS 139
PE A + S+++ R+G +E GER+S
Sbjct: 127 PESASRSSSQSSHQRHSRDGRGELGSEHGERRS 159
>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 25.0 bits (52), Expect = 5.0
Identities = 13/37 (35%), Positives = 28/37 (75%), Gaps = 4/37 (10%)
Frame = -3
Query: 236 QNRLSKK-EAKLQEIEAKEKV---IRDAKLKEEKERA 138
+ +L+K+ E +LQE+E +EK+ I +++L+E+++ A
Sbjct: 107 EEKLAKRREQELQELEKQEKIEAEILESRLQEQRKVA 143
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 5.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 242 FHQNRLSKKEAKLQEIEAKEKVIRD-AKLKEEKERASALEIK 120
F + K+ +E++ + +R+ AK K+EKER ALE K
Sbjct: 30 FEETEEEIKKRSPEELKQAIEALREKAKEKKEKERILALEEK 71
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 25.0 bits (52), Expect = 5.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 58 NSEICRXFFPHFNQKRTT 5
NSE+C FFP ++K T
Sbjct: 793 NSELCHRFFPSMSKKDLT 810
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 25.0 bits (52), Expect = 5.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 58 NSEICRXFFPHFNQKRTT 5
NSE+C FFP ++K T
Sbjct: 793 NSELCHRFFPSMSKKDLT 810
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 25.0 bits (52), Expect = 5.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 155 EEKERASALEIKALEEMASGTAK 87
EEK++AS L + L + SGT K
Sbjct: 191 EEKQQASGLNFRGLAKPISGTLK 213
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 24.6 bits (51), Expect = 6.6
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 236 QNRLSKKEAKLQEIEAKEKVIRDAKLKEEKERA 138
++RL +K LQE A + R+ +L+EE+E++
Sbjct: 116 RDRLQEKLRALQEESANLRRQRENRLREEQEQS 148
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 24.6 bits (51), Expect = 6.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -3
Query: 236 QNRLSKKEAKLQEIEAKEKVIRDAKLKEEKERASALE 126
++ +KKE K ++ EAK++ + KE+KE+ E
Sbjct: 438 EDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKKKSE 474
>SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr
1|||Manual
Length = 408
Score = 24.2 bits (50), Expect = 8.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 181 FSLASISCSFASFFDSLFWWKAPYRTPTVRKDQRPNL 291
F LA + + F +SL + K P+R D PNL
Sbjct: 213 FYLAGLIITSGFFLNSLSFLKIPFRVYLDSHDLTPNL 249
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 24.2 bits (50), Expect = 8.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 215 EAKLQEIEAKEKVIRDAKLKEEKERASALEI 123
E + + E EK +D KEEKE+ +A+++
Sbjct: 191 EKPVPKDEVAEKHSKDKLKKEEKEKKTAVDV 221
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,567,714
Number of Sequences: 5004
Number of extensions: 26885
Number of successful extensions: 122
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 154448264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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