Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_G14
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 174 6e-44
11_01_0220 + 1717861-1717979,1718149-1718281,1718544-1718723,171... 173 9e-44
12_01_0221 + 1671231-1671349,1671613-1671745,1672011-1672190,167... 173 1e-43
12_01_0255 + 1888193-1888914,1890247-1890460,1890535-1890615,189... 32 0.38
11_01_0257 + 1972111-1972832,1974214-1974427,1974502-1974582,197... 32 0.38
02_05_0338 - 28084169-28084366,28084414-28085225,28085565-280855... 31 0.89
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 30 1.5
11_02_0028 + 7517196-7517206,7517256-7517312,7517423-7517503,751... 29 4.7
03_03_0041 - 14007687-14009381 29 4.7
11_06_0610 - 25449085-25453284 28 6.2
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 28 6.2
10_08_0262 + 16307003-16308416,16309501-16309595,16309954-163099... 28 6.2
05_05_0366 + 24442227-24442472,24442549-24442734,24442818-244429... 28 6.2
>01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 174 bits (423), Expect = 6e-44
Identities = 77/132 (58%), Positives = 103/132 (78%)
Frame = -1
Query: 591 SQITEQLIAMGCYEVSLGDTIGVGTAGSVRRLLHEILTVAKPEQLALHFHDTYGQGLSNL 412
+ + ++L MGCYEVSLGDTIGVGT G+V +L ++ E+LA+HFHDTYGQ LSN+
Sbjct: 911 AHVAKELYDMGCYEVSLGDTIGVGTPGTVVPMLEAVMFFVPKEKLAVHFHDTYGQSLSNI 970
Query: 411 LAGLEFGIKTVDSSISGLGGCPYARGASGNLATEDLVYFLYGLGVNTDVDLVKIIEAGRY 232
L L+ G+ VDSS++GLGGCPYA+GASGN+ATED+VY L GLG++T+VDL K++ AG +
Sbjct: 971 LISLQMGVSVVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGISTNVDLGKVMAAGEF 1030
Query: 231 ISNFLGKPTESK 196
I N LG+ + SK
Sbjct: 1031 ICNHLGRQSGSK 1042
>11_01_0220 +
1717861-1717979,1718149-1718281,1718544-1718723,
1719046-1719126,1719259-1719422,1719518-1719654,
1719900-1720015,1720134-1720367
Length = 387
Score = 173 bits (422), Expect = 9e-44
Identities = 78/148 (52%), Positives = 110/148 (74%)
Frame = -1
Query: 624 TVHASRSSVWQSQITEQLIAMGCYEVSLGDTIGVGTAGSVRRLLHEILTVAKPEQLALHF 445
T+H S+ + + ++L MGC E+SLGDTIGVGT GS+ +L +++ ++LA+HF
Sbjct: 239 TIHPSKVAY----VAKELYDMGCSEISLGDTIGVGTPGSILAMLEAVMSFVPVDKLAVHF 294
Query: 444 HDTYGQGLSNLLAGLEFGIKTVDSSISGLGGCPYARGASGNLATEDLVYFLYGLGVNTDV 265
HDTYGQ L+N+L L+ GI VDSS+SGLGGCPYA+GA+GN+ATED+VY L+GLG+ T+V
Sbjct: 295 HDTYGQALANILVSLQLGINIVDSSVSGLGGCPYAKGATGNVATEDVVYMLHGLGIETNV 354
Query: 264 DLVKIIEAGRYISNFLGKPTESKVNRVI 181
DL K+++AG YIS LG+ + SK +
Sbjct: 355 DLNKLMDAGDYISKHLGRQSGSKTTTAL 382
>12_01_0221 +
1671231-1671349,1671613-1671745,1672011-1672190,
1672632-1672712,1672850-1673013,1673109-1673245,
1673492-1673607,1673725-1673958
Length = 387
Score = 173 bits (421), Expect = 1e-43
Identities = 78/148 (52%), Positives = 110/148 (74%)
Frame = -1
Query: 624 TVHASRSSVWQSQITEQLIAMGCYEVSLGDTIGVGTAGSVRRLLHEILTVAKPEQLALHF 445
T+H S+ + + ++L MGC E+SLGDTIGVGT GSV +L +++ +++A+HF
Sbjct: 239 TIHPSKVAY----VAKELYDMGCSEISLGDTIGVGTPGSVLAMLEAVMSFVPVDKIAVHF 294
Query: 444 HDTYGQGLSNLLAGLEFGIKTVDSSISGLGGCPYARGASGNLATEDLVYFLYGLGVNTDV 265
HDTYGQ L+N+L L+ GI VDSS+SGLGGCPYA+GA+GN+ATED+VY L+GLG+ T+V
Sbjct: 295 HDTYGQALANILVSLQLGINIVDSSVSGLGGCPYAKGATGNVATEDVVYMLHGLGIETNV 354
Query: 264 DLVKIIEAGRYISNFLGKPTESKVNRVI 181
DL K+++AG YIS LG+ + SK +
Sbjct: 355 DLNKLMDAGDYISKHLGRQSGSKTTTAL 382
>12_01_0255 +
1888193-1888914,1890247-1890460,1890535-1890615,
1890753-1890842,1890950-1891036,1891553-1891653,
1891966-1892011,1892366-1892440,1892557-1892640,
1892721-1892936,1893216-1893358,1893488-1893629
Length = 666
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = -1
Query: 585 ITEQLIAMGCYEVSLGDTIGVGTAGSVRRLLHEILTVAKPEQLAL---HFHDTYGQGLSN 415
I E++I G +++ DT+G +L+ +I + A+ H + G +N
Sbjct: 250 ILEEVIKAGATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDLGLATAN 309
Query: 414 LLAGLEFGIKTVDSSISGLG 355
LAG G + ++ +I+G+G
Sbjct: 310 TLAGAHAGARQLEVTINGIG 329
>11_01_0257 +
1972111-1972832,1974214-1974427,1974502-1974582,
1974720-1974809,1974911-1974997,1975484-1975584,
1975892-1975937,1976272-1976346,1976459-1976542,
1976620-1976861,1977067-1977258,1977391-1977532
Length = 691
Score = 32.3 bits (70), Expect = 0.38
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = -1
Query: 585 ITEQLIAMGCYEVSLGDTIGVGTAGSVRRLLHEILTVAKPEQLAL---HFHDTYGQGLSN 415
I E++I G +++ DT+G +L+ +I + A+ H + G +N
Sbjct: 250 ILEEVIKAGATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDLGLATAN 309
Query: 414 LLAGLEFGIKTVDSSISGLG 355
LAG G + ++ +I+G+G
Sbjct: 310 TLAGAHAGARQLEVTINGIG 329
>02_05_0338 -
28084169-28084366,28084414-28085225,28085565-28085595,
28085638-28086214,28086439-28087145,28087188-28087228,
28087253-28087366,28087517-28088108
Length = 1023
Score = 31.1 bits (67), Expect = 0.89
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -1
Query: 642 RPSDXRTVHASRSSVWQSQITEQLIAMGCYEVSLGDTIGVGTA 514
RP VH R WQ ++T L AM C+ VS G GV TA
Sbjct: 9 RPDKFTGVHFKR---WQIRVTLWLTAMKCFWVSTGKPEGVLTA 48
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +2
Query: 305 RSSVARLPLAPRAYGHPPSPEMEESTVLIPNSRPASKLESPCPYV-SWK*RASCSGFATV 481
RSS RLP P+A PP+P + + + P + + + SW
Sbjct: 54 RSSPRRLPSPPQASHPPPAPRLSSAATAAGVAAPGVGVVARLMGLESWPATGPVGAPPAA 113
Query: 482 RIS*RSRRTEPAVPTPIVSPSD 547
R + R+ E A PTP D
Sbjct: 114 RRPQKQRKVEVASPTPRADEPD 135
>11_02_0028 +
7517196-7517206,7517256-7517312,7517423-7517503,
7518009-7518108,7518454-7518507,7519045-7519115,
7519248-7519455,7519647-7519700,7519934-7520025,
7520090-7520285,7521158-7521339,7521429-7521496,
7522848-7522920,7523010-7523071,7523155-7524079,
7524843-7525133,7525601-7525871
Length = 931
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -1
Query: 498 LLHEILTVAKPEQLALHFHDTYGQGLSNLLAGLEFGIKTVDSSISGLGGCPY--ARGASG 325
LLH L+ P+Q+++ +D Y +N + F I + + CPY G+S
Sbjct: 239 LLHHRLS---PKQISICLNDMYESRTANGQPPVTFAIAAQEKEDIHISECPYFIISGSSD 295
Query: 324 NLATEDLVYFLYGLGVNTDVDLVK 253
+ +D+ ++ G ++DL K
Sbjct: 296 AFSAKDMWNYVKENGSFDNLDLTK 319
>03_03_0041 - 14007687-14009381
Length = 564
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 230 MYRPASIIFTRSTSVLTPRPYRK*TRSSVARLPLAPRAYGHPPSPEMEESTVLIP 394
++ PA + T S + +P P + R + LP AP A P E E L+P
Sbjct: 64 LFHPACVRLTLSHLLPSPDPSLRFLRFLSSHLPAAPDAAPAEPEHEHEHEPPLLP 118
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 326 PLAPRAYGHPPSPEMEESTVLIPNSRPASKLESPCPYVSWK*RASCSGFATVRIS*RSRR 505
P+ P ++ PP+P EE T P S P + +SP P+ K S + + S +S
Sbjct: 751 PIPPTSHTSPPTP--EEYTPSPPKSSPPEE-KSPPPHSPEKSPPSEAHPTSPPPSEKSPP 807
Query: 506 T---EPAVPTPIVSPSDTS 553
T E + PTP SPS S
Sbjct: 808 TPAEESSPPTPEKSPSPPS 826
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +1
Query: 538 TKRYFITAHRNQLFCYLGLPHGA 606
T++YF+TA ++ +C+ +P G+
Sbjct: 289 TQKYFVTASKDNTWCFYDIPSGS 311
>10_08_0262 +
16307003-16308416,16309501-16309595,16309954-16309959,
16310567-16310671
Length = 539
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +2
Query: 365 EMEESTVLIPNSRPASKLESPCPYVSWK*RASCSGFATVRIS*RSRRTEPAVPTPIVSPS 544
EME T I ++ P + P P++ W R C + R + T +P P+ S
Sbjct: 289 EMEIVTPKIVSATPPGDCD-PDPFLEWLRRRECKDLKRTLVHGRWKATTWRMPIPVTSWD 347
Query: 545 D 547
D
Sbjct: 348 D 348
>05_05_0366 +
24442227-24442472,24442549-24442734,24442818-24442983,
24443109-24443560
Length = 349
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 513 GSVRRLLHEILTVAKPEQLALHFHDTYGQG 424
G +R +L E T+A P L +H+HD + QG
Sbjct: 55 GEMRMILEEDPTLA-PSLLRMHYHDCFVQG 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,790,594
Number of Sequences: 37544
Number of extensions: 410773
Number of successful extensions: 1141
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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