Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_G14
         (702 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025726-20|AAK73908.1|  318|Caenorhabditis elegans Hypothetical...   159   2e-39
AC026301-4|AAK68895.1|  347|Caenorhabditis elegans Hypothetical ...    31   0.60 
AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...    29   4.3  

>AC025726-20|AAK73908.1|  318|Caenorhabditis elegans Hypothetical
           protein Y71G12B.10 protein.
          Length = 318

 Score =  159 bits (386), Expect = 2e-39
 Identities = 72/133 (54%), Positives = 99/133 (74%)
 Frame = -1

Query: 591 SQITEQLIAMGCYEVSLGDTIGVGTAGSVRRLLHEILTVAKPEQLALHFHDTYGQGLSNL 412
           +++ E+L+  GCYEVSLGDTIGVGT  +V ++L  +L     E+LA+HFHDTYGQ L+N+
Sbjct: 173 ARVAEKLLESGCYEVSLGDTIGVGTVKTVSKMLDTVLKSVPAEKLAVHFHDTYGQALANV 232

Query: 411 LAGLEFGIKTVDSSISGLGGCPYARGASGNLATEDLVYFLYGLGVNTDVDLVKIIEAGRY 232
           L  +E GI++ DSSI+GLGGCPYA+GA+GNLATEDL+YFL G G  T V+L K++E  ++
Sbjct: 233 LISIEKGIRSADSSIAGLGGCPYAKGATGNLATEDLLYFLKGNGFETGVNLDKVVETAKW 292

Query: 231 ISNFLGKPTESKV 193
            +   G    S+V
Sbjct: 293 FNEAAGYDKWSRV 305


>AC026301-4|AAK68895.1|  347|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.4 protein.
          Length = 347

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 145 FDNISVISKSITNDPVNFGFGRFSKEVGNVSTCFYNLY 258
           F+  SVIS    N P+NF   R  K   ++S  F+N +
Sbjct: 278 FEVASVISDKAPNYPLNFSVRRLQKSYNSLSLLFFNFF 315


>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
           protein Y59A8B.6 protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -1

Query: 372 SISGLGGCPYARGASGNLATEDLVYFLYGLGVNTDVDLVKIIEAGRYISNF-LGKPTESK 196
           S  G GG   A GA   + T      +   G +TD+DLVKI +A   I +  L + ++S 
Sbjct: 229 STLGGGGGAAAAGAKSGIMTPGWKSDIPSSGTSTDLDLVKIGQARNKIMDMQLTQVSDSV 288

Query: 195 VNRVISD 175
             + + D
Sbjct: 289 TGQTVVD 295


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,882,419
Number of Sequences: 27780
Number of extensions: 337898
Number of successful extensions: 872
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)