Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_G11
         (391 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0211 + 1604799-1605037,1605420-1605575,1605972-1606043,160...    27   7.0  

>06_01_0211 +
           1604799-1605037,1605420-1605575,1605972-1606043,
           1606325-1606396,1606608-1606679,1606777-1606848,
           1606936-1607007,1607092-1607160,1607278-1607349,
           1607630-1607701,1607786-1607857,1607940-1608011,
           1608100-1608171,1608286-1608357,1608449-1608520,
           1608633-1608704,1608801-1608872,1608962-1609033,
           1609120-1609191,1609283-1609353,1609439-1609570,
           1609676-1610014,1610097-1610467,1610599-1610928,
           1611115-1611150
          Length = 964

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 163 TLQECQLKF*KNIHNKKSFFSYSNGVNLIEVQLET 267
           T+ +C+LK  K I  K+ +  Y++ +   E +LET
Sbjct: 646 TVYKCELKSGKAIAVKRLYSQYNHSLREFETELET 680


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,070,124
Number of Sequences: 37544
Number of extensions: 89933
Number of successful extensions: 109
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)