Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_G11
         (391 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   2.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   2.2  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    20   8.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   8.7  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 102 KEKXTGMKEFDXTKTAXFCEKVVLLCILYF 13
           +EK +  KE   TKT      V L+C L F
Sbjct: 606 REKSSAKKERKATKTLAIVLGVFLICWLPF 635


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 208 CCEYFFKTLTGTPVKFKKCRLNQIAF 131
           C  YF + L  TP K     L  +AF
Sbjct: 53  CSPYFRELLKSTPCKHPVIVLQDVAF 78


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/30 (23%), Positives = 14/30 (46%)
 Frame = -1

Query: 163 FKKCRLNQIAFRPTKCXAXXERKXDGNERI 74
           + + + + + F P K     E   DGN+ +
Sbjct: 173 YLRIKKHAVKFNPAKVKLRFENLFDGNKEL 202


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 193 KNIHNKKSFFSYSNGVN 243
           +N +N   F+S SNG N
Sbjct: 135 ENNYNDNYFYSKSNGSN 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,481
Number of Sequences: 438
Number of extensions: 1090
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)