Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_G08
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117195-8|CAB55030.1| 258|Caenorhabditis elegans Hypothetical ... 219 1e-57
AL117195-21|CAB55033.2| 313|Caenorhabditis elegans Hypothetical... 196 1e-50
U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astaci... 29 4.1
AL117204-35|CAB55154.2| 861|Caenorhabditis elegans Hypothetical... 29 4.1
U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical pr... 28 5.4
U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr... 27 9.4
AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor typ... 27 9.4
>AL117195-8|CAB55030.1| 258|Caenorhabditis elegans Hypothetical
protein Y57A10A.10 protein.
Length = 258
Score = 219 bits (536), Expect = 1e-57
Identities = 97/193 (50%), Positives = 133/193 (68%)
Frame = -3
Query: 678 GEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAKKVYDG 499
GEP++AP K +++ T+ WYLVFY PFD YK+AK PVK V A MKE+ RA KV G
Sbjct: 44 GEPVIAPFKRHDDIILATIIWYLVFYAPFDGIYKIAKITPVKCVLAVMKEVKRAYKVSHG 103
Query: 498 VSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTKASLVA 319
VSHAAKLYPN+Y++ V+VGT KG G+G + +E+L+RG W PT E ++PSF TKA +VA
Sbjct: 104 VSHAAKLYPNSYIVQVLVGTAKGAGSGIVRTLEQLVRGVWLPTHNELLRPSFATKACVVA 163
Query: 318 SVIFVLDKKTDLISAPHALXXXXXXXXXXXFKLSSILLGIHDPFVPFENLFCALFMGGIW 139
+ + L+K ++APH L FKLS+++L + DPF P ENLFCA+FMGGIW
Sbjct: 164 ASVLALEKSGTYLTAPHDLVYLVIVGFFVYFKLSAVILHVTDPFAPIENLFCAIFMGGIW 223
Query: 138 DSLAKLLGKGQPK 100
D++++ L + +
Sbjct: 224 DAVSRALAASRDR 236
>AL117195-21|CAB55033.2| 313|Caenorhabditis elegans Hypothetical
protein Y57A10A.28 protein.
Length = 313
Score = 196 bits (478), Expect = 1e-50
Identities = 83/185 (44%), Positives = 128/185 (69%)
Frame = -3
Query: 678 GEPILAPLKNTPQLVIGTVTWYLVFYTPFDVGYKVAKFLPVKVVAAAMKEIYRAKKVYDG 499
GEPI++PLK +++G++ WYLVFY+PFDV +++A + PVK+ + +KE+ R K+ G
Sbjct: 82 GEPIISPLKQHADILLGSIVWYLVFYSPFDVVFRLATWFPVKLGLSVLKEVQRTHKIAAG 141
Query: 498 VSHAAKLYPNAYVIMVIVGTLKGNGAGFTKLVERLIRGAWTPTAMETMQPSFYTKASLVA 319
V HA ++YP +Y++ ++VG KG G+G K+VE+L RG W PT E ++PSF TKA ++A
Sbjct: 142 VKHAVRIYPESYLVQILVGVAKGAGSGVVKIVEQLARGTWHPTNHEILRPSFTTKACVIA 201
Query: 318 SVIFVLDKKTDLISAPHALXXXXXXXXXXXFKLSSILLGIHDPFVPFENLFCALFMGGIW 139
S++F L++ + ++APH L FKL+S+ L +HD +P EN+ CA+FMGGI
Sbjct: 202 SIVFTLERHSMYVTAPHDLVYLCVVGFFIYFKLASLCLSVHDVLMPIENVLCAVFMGGII 261
Query: 138 DSLAK 124
D+ AK
Sbjct: 262 DAFAK 266
>U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astacin
protease protein 7 protein.
Length = 382
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 570 KFLPVKVVAAAMKEIYRAKK-VYDGVSHAAKLYPNAYV 460
K +PV+VV +I ++ +GVS AAKL+PNA +
Sbjct: 57 KHIPVEVVNDFKSDIRLPRRHKRNGVSRAAKLWPNARI 94
>AL117204-35|CAB55154.2| 861|Caenorhabditis elegans Hypothetical
protein Y116A8C.14 protein.
Length = 861
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -1
Query: 185 CHLRICSAPYSWAAFGIRWPSCSAKDN 105
C L + APY W +WP C N
Sbjct: 488 CRLPLSVAPYEWPDDSTQWPICRENHN 514
>U23453-2|AAV58891.1| 464|Caenorhabditis elegans Hypothetical
protein B0252.3c protein.
Length = 464
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 384 AWTPTAMETMQPSFYTKASLVASVIFVLDK 295
AW+P A + PSF KAS +S I V D+
Sbjct: 33 AWSPLAFTGLCPSFVVKASENSSFIGVADE 62
>U23453-1|AAP86622.1| 484|Caenorhabditis elegans Hypothetical
protein B0252.3b protein.
Length = 484
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 384 AWTPTAMETMQPSFYTKASLVASVIFVLDK 295
AW+P A + PSF KAS +S I V D+
Sbjct: 53 AWSPLAFTGLCPSFVVKASENSSFIGVADE 82
>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical
protein ZK896.8 protein.
Length = 1112
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 111 LCRATWPANPKCRP*IRR-RTDSQMARRDRG 200
L R W NP+ RP IRR R +++M + +G
Sbjct: 821 LLRDCWSENPEIRPSIRRVRLNTEMVLKTKG 851
>AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1113
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 111 LCRATWPANPKCRP*IRR-RTDSQMARRDRG 200
L R W NP+ RP IRR R +++M + +G
Sbjct: 822 LLRDCWSENPEIRPSIRRVRLNTEMVLKTKG 852
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,116,101
Number of Sequences: 27780
Number of extensions: 296568
Number of successful extensions: 840
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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