BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_G08
(683 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 27 0.13
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 27 0.13
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 27 0.13
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 27 0.13
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 27 0.13
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 27 0.13
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 27 0.13
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 27 0.13
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 27 0.22
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 27 0.22
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 27 0.22
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 27 0.22
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 27 0.22
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 27 0.22
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 27 0.22
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 27 0.22
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 27 0.22
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 27 0.22
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 27 0.22
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 27 0.22
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 27 0.22
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 27 0.22
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 27 0.22
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 27 0.22
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 27 0.22
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 24 1.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 24 1.6
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 2.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 6.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 8.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 8.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 8.3
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 8.3
AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 21 8.3
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R HE
Sbjct: 28 RSRTKEERLQHRREVWLIQQEREREHE 54
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R HE
Sbjct: 28 RSRTKEERLQHRREVWLIQQEREREHE 54
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R HE
Sbjct: 28 RSRTKEERLQHRREVWLIQQEREREHE 54
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R HE
Sbjct: 28 RSRTKEERLQHRREVWLIQQEREREHE 54
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R HE
Sbjct: 28 RSRTKEERLQHRREVWLIQQEREREHE 54
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R HE
Sbjct: 28 RSRTKEERLQHRREVWLIQQEREREHE 54
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R HE
Sbjct: 28 RSRTKEERLQHRREVWLIQQEREREHE 54
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 27.5 bits (58), Expect = 0.13
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R HE
Sbjct: 28 RSRTKEERLQHRREVWLIQQEREREHE 54
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 26.6 bits (56), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL+H W +++ R R H+
Sbjct: 28 RSRTKEERLQHRREAWLIQQEREREHQ 54
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 330 KPLCRSWVAWFPSQS 374
K CRSW++ FP++S
Sbjct: 398 KNCCRSWLSKFPTRS 412
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 330 KPLCRSWVAWFPSQS 374
K CRSW++ FP++S
Sbjct: 398 KNCCRSWLSKFPTRS 412
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.4 bits (48), Expect = 2.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 423 AGFTKLVERLIRGAWTP 373
AGF+K+ E L+ W P
Sbjct: 424 AGFSKIAENLLEKNWLP 440
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.7
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 175 ESVLRLIHGRHLGF 134
ES LI GRHLGF
Sbjct: 213 ESTCTLILGRHLGF 226
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 6.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 490 RSQTVPERLRHYGHCWYVER*RCRLHE 410
RS+T ERL++ W V++ R + +E
Sbjct: 28 RSRTKEERLQYRREAWLVQQEREQEYE 54
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 381 WTPTAMETMQPSFYTKASLVASVIFVLD 298
WTPT + +PS + V V+ +D
Sbjct: 98 WTPTVYVSNEPSSAITGNNVKDVLVSID 125
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 612 LVFYTPFDVGYKVA 571
LVFY P D G KV+
Sbjct: 260 LVFYLPSDSGEKVS 273
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 612 LVFYTPFDVGYKVA 571
LVFY P D G KV+
Sbjct: 256 LVFYLPSDSGEKVS 269
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 612 LVFYTPFDVGYKVA 571
LVFY P D G KV+
Sbjct: 269 LVFYLPSDSGEKVS 282
>AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein
protein.
Length = 87
Score = 21.4 bits (43), Expect = 8.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 350 GCMVSIAVGVQAPRISLSTNFVKPAPLPFNVPTMTIMT*AFGY 478
G + AV ++ PR + P P P N + ++ A GY
Sbjct: 30 GPYIRQAVAMRDPRSNRGPVLFPPGPPPNNEDSSGVIVGASGY 72
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,594
Number of Sequences: 438
Number of extensions: 3744
Number of successful extensions: 43
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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