Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_G07
         (492 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12535-1|AAA62280.1|  822|Homo sapiens epidermal growth factor r...    33   0.41 
BC030010-1|AAH30010.1|  822|Homo sapiens epidermal growth factor...    33   0.41 
AB209603-1|BAD92840.1|  337|Homo sapiens amyloid beta (A4) precu...    31   1.6  
AJ404607-1|CAB94913.2|  264|Homo sapiens hypothetical protein pr...    30   5.0  
AF307451-1|AAK30049.1|  578|Homo sapiens Cat eye syndrome critic...    29   6.6  
Y07968-1|CAA69264.1|  400|Homo sapiens TFG protein.                    29   8.8  
DQ232881-1|ABB18374.1|  868|Homo sapiens LIN41 protein.                29   8.8  
CR456781-1|CAG33062.1|  400|Homo sapiens TFG protein.                  29   8.8  
BT007428-1|AAP36096.1|  400|Homo sapiens TRK-fused gene protein.       29   8.8  
BC023599-1|AAH23599.1|  400|Homo sapiens TRK-fused gene protein.       29   8.8  
BC009241-1|AAH09241.1|  400|Homo sapiens TRK-fused gene protein.       29   8.8  
BC001483-1|AAH01483.1|  400|Homo sapiens TFG protein protein.          29   8.8  
AK127398-1|BAC86959.1|  719|Homo sapiens protein ( Homo sapiens ...    29   8.8  
AB097041-1|BAC77394.1|  396|Homo sapiens putative MAPK activatin...    29   8.8  
AB097040-1|BAC77393.1|  358|Homo sapiens putative MAPK activatin...    29   8.8  

>U12535-1|AAA62280.1|  822|Homo sapiens epidermal growth factor
           receptor kinase substrate protein.
          Length = 822

 Score = 33.5 bits (73), Expect = 0.41
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 273 RGAHVRRRPRATTLHGQAQRSLSPPPRGPKPA 368
           +G   +RRP A  +   A  S+ PPPR P PA
Sbjct: 188 KGGKQKRRPDALRMISNADPSIPPPPRAPAPA 219


>BC030010-1|AAH30010.1|  822|Homo sapiens epidermal growth factor
           receptor pathway substrate 8 protein.
          Length = 822

 Score = 33.5 bits (73), Expect = 0.41
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 273 RGAHVRRRPRATTLHGQAQRSLSPPPRGPKPA 368
           +G   +RRP A  +   A  S+ PPPR P PA
Sbjct: 188 KGGKQKRRPDALRMISNADPSIPPPPRAPAPA 219


>AB209603-1|BAD92840.1|  337|Homo sapiens amyloid beta (A4)
           precursor protein-binding, family A, member 3 variant
           protein.
          Length = 337

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 22/63 (34%), Positives = 29/63 (46%)
 Frame = +3

Query: 285 VRRRPRATTLHGQAQRSLSPPPRGPKPAARQ*IFVQRGRAARLGASEGAGGARRDXIILE 464
           VR RP A    G+A  +LS  P  P P +R  +F  R  A+ + AS   G +      L 
Sbjct: 193 VRPRPLAPGWGGRA--ALSTAPEQPPPLSRPPLFSPRSAASSVVASPSVGASASATASLR 250

Query: 465 SRG 473
           S G
Sbjct: 251 SMG 253


>AJ404607-1|CAB94913.2|  264|Homo sapiens hypothetical protein
           protein.
          Length = 264

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 370 AAGFGPRGGGLSDRCACPWSVVARGRRRTCA-PRSLCESSTSTL 242
           A  +GP GGG +   A P + +    RR C+ PRS   SS+  +
Sbjct: 48  ARSYGPPGGGSAQHAALPPAQLPLSLRRRCSRPRSRPSSSSRAI 91


>AF307451-1|AAK30049.1|  578|Homo sapiens Cat eye syndrome critical
           region candidate gene number 6 protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 328 CACPWSVVARGRRRTCAPRSLC 263
           C CP     RGRRR CAP   C
Sbjct: 175 CGCPDRPGRRGRRRGCAPSPRC 196


>Y07968-1|CAA69264.1|  400|Homo sapiens TFG protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 267 SERGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAAR 374
           S+ GA+ + RP  T+L G    +++PPP GP P AR
Sbjct: 352 SQPGAY-QPRPGFTSLPGS---TMTPPPSGPNPYAR 383


>DQ232881-1|ABB18374.1|  868|Homo sapiens LIN41 protein.
          Length = 868

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +1

Query: 277 GRTSDAGPAPPHSTDRHSDH*VHPRAVRSLP 369
           GR      A  HS  RH  H  HPRA  S P
Sbjct: 135 GRAGAPAGAGGHSNHRHHAHHAHPRASASAP 165


>CR456781-1|CAG33062.1|  400|Homo sapiens TFG protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 267 SERGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAAR 374
           S+ GA+ + RP  T+L G    +++PPP GP P AR
Sbjct: 352 SQPGAY-QPRPGFTSLPGS---TMTPPPSGPNPYAR 383


>BT007428-1|AAP36096.1|  400|Homo sapiens TRK-fused gene protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 267 SERGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAAR 374
           S+ GA+ + RP  T+L G    +++PPP GP P AR
Sbjct: 352 SQPGAY-QPRPGFTSLPGS---TMTPPPSGPNPYAR 383


>BC023599-1|AAH23599.1|  400|Homo sapiens TRK-fused gene protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 267 SERGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAAR 374
           S+ GA+ + RP  T+L G    +++PPP GP P AR
Sbjct: 352 SQPGAY-QPRPGFTSLPGS---TMTPPPSGPNPYAR 383


>BC009241-1|AAH09241.1|  400|Homo sapiens TRK-fused gene protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 267 SERGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAAR 374
           S+ GA+ + RP  T+L G    +++PPP GP P AR
Sbjct: 352 SQPGAY-QPRPGFTSLPGS---TMTPPPSGPNPYAR 383


>BC001483-1|AAH01483.1|  400|Homo sapiens TFG protein protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 267 SERGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAAR 374
           S+ GA+ + RP  T+L G    +++PPP GP P AR
Sbjct: 352 SQPGAY-QPRPGFTSLPGS---TMTPPPSGPNPYAR 383


>AK127398-1|BAC86959.1|  719|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45489 fis, clone BRTHA2005448, highly  similar
           to Mus musculus calpain 12 (Capn12). ).
          Length = 719

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -3

Query: 376 WRAAGF-GPRGGGLSDRCACPWSVVARGRRR 287
           W AAG  GP  GG + +C    S++ R RRR
Sbjct: 407 WGAAGARGPARGGRTPKCTVLLSLIQRNRRR 437


>AB097041-1|BAC77394.1|  396|Homo sapiens putative MAPK activating
           protein protein.
          Length = 396

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 267 SERGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAAR 374
           S+ GA+ + RP  T+L G    +++PPP GP P AR
Sbjct: 348 SQPGAY-QPRPGFTSLPGS---TMTPPPSGPNPYAR 379


>AB097040-1|BAC77393.1|  358|Homo sapiens putative MAPK activating
           protein protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = +3

Query: 267 SERGAHVRRRPRATTLHGQAQRSLSPPPRGPKPAAR 374
           S+ GA+ + RP  T+L G    +++PPP GP P AR
Sbjct: 310 SQPGAY-QPRPGFTSLPGS---TMTPPPSGPNPYAR 341


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,644,180
Number of Sequences: 237096
Number of extensions: 1127523
Number of successful extensions: 3405
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3404
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)