Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_G07
         (492 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    27   5.6  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    27   5.6  

>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
           glp-1 protein.
          Length = 1492

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = +3

Query: 300 RATTLHGQAQRSLSPPPRGPKPAARQ*IFVQRGRAARLGASEGAGGA 440
           RA     QAQ      P  P P++     VQ  R+ R GA EGA GA
Sbjct: 801 RARKQAPQAQIPEDQGPPSPTPSSICDFPVQSQRSQRFGAFEGAQGA 847


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
           protein Y53H1C.2a protein.
          Length = 1512

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = +3

Query: 300 RATTLHGQAQRSLSPPPRGPKPAARQ*IFVQRGRAARLGASEGAGGA 440
           RA     QAQ      P  P P++     VQ  R+ R GA EGA GA
Sbjct: 821 RARKQAPQAQIPEDQGPPSPTPSSICDFPVQSQRSQRFGAFEGAQGA 867


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,563,278
Number of Sequences: 27780
Number of extensions: 178992
Number of successful extensions: 452
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)