Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_G02
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.1  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.2  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 68  LNQLYVMPFMHIYRAHYFTHLPHLLHNII 154
           + Q Y +  +++ ++  F +LP L HN+I
Sbjct: 114 VKQCYHLQKINVQQSGIFINLPFLEHNLI 142


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 93  NGITYSWFNYVLNL 52
           NGIT+ W  Y+ ++
Sbjct: 151 NGITFGWHTYIFDV 164


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -1

Query: 546 DAQVTIDFKNMIELAFARDSACVE*LLIA*RYILPPHF 433
           + QV I F+N    A     A +E L ++ R +LPP F
Sbjct: 156 EPQVKIWFQNRRAKAKRLQEAELEKLRLSARPLLPPSF 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,138
Number of Sequences: 336
Number of extensions: 2927
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)