Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F22
         (711 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical pr...    36   0.038
Z81047-8|CAB02830.2|  323|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z69787-10|CAH65466.1|  398|Caenorhabditis elegans Hypothetical p...    30   1.4  
U00048-3|AAB53827.3|  315|Caenorhabditis elegans Nematode astaci...    29   4.3  
AJ561201-1|CAD99204.1|  212|Caenorhabditis elegans NAS-4 protein...    29   4.3  
Z95619-4|CAB09113.2|  397|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z82285-1|CAB05302.1|  634|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z81099-2|CAB03188.2|  297|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical ...    28   7.6  
AF077529-5|AAN60534.1|  756|Caenorhabditis elegans Hypothetical ...    28   7.6  
AF077529-4|AAC26255.2|  783|Caenorhabditis elegans Hypothetical ...    28   7.6  

>U40060-5|AAA81143.2|  690|Caenorhabditis elegans Hypothetical
           protein F38B6.6 protein.
          Length = 690

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 18/75 (24%), Positives = 37/75 (49%)
 Frame = +1

Query: 481 PHHDQFWFHLYLTAEYLSFHLQLILNLFLDYLHRVYLHDQVNSQIYQYHCHHLTISQSQH 660
           P H Q W +L++  ++LS     +++L    L  V    +V+ QI   H  H   + +++
Sbjct: 565 PSHSQSWTNLFVVLDHLS-QCSQVIDLSYQALSSVPNESRVHMQIGSCHAKHSNFTAAEN 623

Query: 661 HVFETIXIFQSNLNF 705
           H+   I +  +++ F
Sbjct: 624 HIKSAIDLNPTSVLF 638


>Z81047-8|CAB02830.2|  323|Caenorhabditis elegans Hypothetical
           protein C41G6.10 protein.
          Length = 323

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +1

Query: 214 RYFLFSFQCSCFL--MYYADCLMPFSMIPI-A*NSNGLLKTLHYFHFCIFL 357
           +++L SFQ SC L  ++    + P  ++PI A  SNG+L  +   H  I +
Sbjct: 46  KFYLLSFQISCVLLDLHVTMLMQPVGLLPICAGYSNGILSKVFKLHSHILM 96


>Z69787-10|CAH65466.1|  398|Caenorhabditis elegans Hypothetical
           protein C44C10.11 protein.
          Length = 398

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = -3

Query: 679 EWSQKHGVEIDLSLDD----DNDIGIFENLLGHVNKLCEDNQEIDLGLTVNEKRDTQQLD 512
           E  QKH  E+ +        +ND+ +  N + H+++L E+N   +L   + +K D +   
Sbjct: 282 ELKQKHIEELQMKTTQITKLENDVKLNGNFMDHISELTEENH--NLKEQLKQKTDAETKM 339

Query: 511 IGETKIDH 488
           I E K  H
Sbjct: 340 IAEMKKKH 347


>U00048-3|AAB53827.3|  315|Caenorhabditis elegans Nematode astacin
           protease protein 4 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 224 KKYLERKIQLNEGCGKRISYKWPNNIILQTL 132
           KK++E   +L     K+I  +WPNN I  TL
Sbjct: 83  KKFVEENNKLGRNAIKQIYRRWPNNEIPYTL 113


>AJ561201-1|CAD99204.1|  212|Caenorhabditis elegans NAS-4 protein
           protein.
          Length = 212

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 224 KKYLERKIQLNEGCGKRISYKWPNNIILQTL 132
           KK++E   +L     K+I  +WPNN I  TL
Sbjct: 51  KKFVEENNKLGRNAIKQIYRRWPNNEIPYTL 81


>Z95619-4|CAB09113.2|  397|Caenorhabditis elegans Hypothetical
           protein H21P03.2 protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 22/85 (25%), Positives = 36/85 (42%)
 Frame = -3

Query: 532 RDTQQLDIGETKIDHGEAVSRDTFNMLLNCQTKKQAIVCKHDINGIKDTPTLETFLHKEE 353
           R T Q+D  E  I +  + SR   NM       +   V   + NG+           +E+
Sbjct: 302 RKTDQIDYYEL-ITNPTSFSRTVENMFYVSYLMRDREVYLLEENGVPILKKPTAVNDQEK 360

Query: 352 IYRNENNAMSLTNHLSFMQWESLKR 278
           +  +E N+      LSF QW++L +
Sbjct: 361 LQNDERNSTHGLTPLSFEQWKTLSQ 385


>Z82285-1|CAB05302.1|  634|Caenorhabditis elegans Hypothetical
           protein T28F3.1a protein.
          Length = 634

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 4/139 (2%)
 Frame = -3

Query: 700 LDCFGRXEWSQKHGVEIDLSLDDDNDIGIFENLLGHVNKLCEDNQEIDLGLTVNEKRDTQ 521
           ++C+   +W +      D     D+ IG  +  L  + +   D  EI   L  NEK+  +
Sbjct: 247 IECYDHDKWKKGEEPRGDAKFSRDDLIGTAQTTLNELLRGSSDAVEI---LLTNEKKKAK 303

Query: 520 QLD----IGETKIDHGEAVSRDTFNMLLNCQTKKQAIVCKHDINGIKDTPTLETFLHKEE 353
           + D     G  KI +   V   TF   ++  T+    V   D       P   + LH   
Sbjct: 304 KGDKYKCSGTLKIWNSRIVIEPTFLDFISGGTQLDFAVAV-DFTASNGPPKSSSSLHFMS 362

Query: 352 IYRNENNAMSLTNHLSFMQ 296
             R     ++L + LS  Q
Sbjct: 363 ADRPNQYELALRSVLSICQ 381


>Z81532-3|CAC70088.2|  659|Caenorhabditis elegans Hypothetical
           protein F36F2.6 protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
 Frame = -3

Query: 709 MKNLDCFGRXEWSQKHGVEIDLSLDDDNDIGIFENLLGHVNKLCEDNQEIDLGLTVNEKR 530
           + N+D  G+   +  +  E+D +L DD D G  E+     N + ED  + +L     EK 
Sbjct: 463 LANMDTIGKAALADMNN-EVDEALSDDEDDGDNEDEDDDGNDVGEDKGDENLE-EKQEKN 520

Query: 529 DTQQLDI---GETKIDHGEAVSRDT 464
           + +  D+   G  +   G+A+  +T
Sbjct: 521 EEEMDDVEQNGSVENQSGDALENET 545


>Z81099-2|CAB03188.2|  297|Caenorhabditis elegans Hypothetical
           protein K08F9.3 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 200 VFFFPDIFYFLFNVLVS 250
           +FFF D+FYF+ NV V+
Sbjct: 86  LFFFGDLFYFILNVKVT 102


>AL132859-4|CAB60492.1|  365|Caenorhabditis elegans Hypothetical
           protein Y39C12A.8 protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/62 (19%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = +3

Query: 288 DSHCIKLKWFVKDIALFSFL----YISSLCKKVSNVGVSFIPLISCLQTIACFLVWQLSN 455
           + + + + + V  I LF  +    Y  SL + V N+ ++++ +I+ +  + C++ W++  
Sbjct: 252 EEYLVVIFFIVVTIVLFGLIVHGMYTGSLLRTVFNLVITYLRIIAGIFGVFCWISWKIFQ 311

Query: 456 ML 461
           ++
Sbjct: 312 LI 313


>AF077529-5|AAN60534.1|  756|Caenorhabditis elegans Hypothetical
           protein C09E8.1b protein.
          Length = 756

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 321 KDIALFSFLYISSLCKKVSNVGVSFIPLISCLQTIACFLV 440
           K +A+F FL+  +   K  + GV F+P  + ++ I  +LV
Sbjct: 500 KLVAVFDFLWAGNDVNKHISAGVQFLPFPTVIRQIVGYLV 539


>AF077529-4|AAC26255.2|  783|Caenorhabditis elegans Hypothetical
           protein C09E8.1a protein.
          Length = 783

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +3

Query: 321 KDIALFSFLYISSLCKKVSNVGVSFIPLISCLQTIACFLV 440
           K +A+F FL+  +   K  + GV F+P  + ++ I  +LV
Sbjct: 500 KLVAVFDFLWAGNDVNKHISAGVQFLPFPTVIRQIVGYLV 539


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,820,451
Number of Sequences: 27780
Number of extensions: 293666
Number of successful extensions: 875
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)