Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F21
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.9  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
 Frame = +3

Query: 273 PPISACSLTXISKYW*MMVTASSIPVPEPMA---PRKSASTDRAPMHSPPNAAA 425
           PP    + T IS     M + ++ P P   +   P   AS   AP+H P   AA
Sbjct: 12  PPAPQSAATPISSSG--MTSPAAAPPPATTSSGSPASVASNASAPLHIPAKRAA 63


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 388 TEPRCTVLRTRPPSGCSGSV 447
           T+P C  L T+PP   S ++
Sbjct: 109 TQPMCESLNTQPPVTSSSNI 128


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 388 TEPRCTVLRTRPPSGCSGSV 447
           T+P C  L T+PP   S ++
Sbjct: 109 TQPMCESLNTQPPVTSSSNI 128


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 388 TEPRCTVLRTRPPSGCSGSV 447
           T+P C  L T+PP   S ++
Sbjct: 109 TQPMCESLNTQPPVTSSSNI 128


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 179 DIIRCTFSYXVVLDVKASLYF 117
           D+I+CT S    +   A LYF
Sbjct: 61  DVIQCTSSGLQAIRCPAGLYF 81


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 498 FSCFATSLAEEPDTSIQVFEKKAQE 572
           F+C AT+     DTSI +  ++  E
Sbjct: 873 FTCVATNAFGSDDTSINMIVQEVPE 897


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -1

Query: 610 PVHALLYVLFMLGSCAFFSKTWI 542
           P++   Y++ +    A+   TWI
Sbjct: 72  PIYKNTYLIILFADFAYLETTWI 94


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -1

Query: 610 PVHALLYVLFMLGSCAFFSKTWI 542
           P++   Y++ +    A+   TWI
Sbjct: 90  PIYKNTYLIILFADFAYLETTWI 112


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +3

Query: 393 APMHSPP 413
           APMHSPP
Sbjct: 195 APMHSPP 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,713
Number of Sequences: 336
Number of extensions: 2596
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)