Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_F21
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0577 - 10862976-10863215,10863653-10863788,10863906-108640... 199 2e-51
09_02_0576 - 10853361-10853600,10854033-10854168,10854285-108544... 199 2e-51
03_02_0140 + 5864612-5864955,5865154-5865381,5865460-5865814,586... 199 2e-51
09_04_0707 + 19645471-19646112 122 3e-28
09_04_0704 + 19623046-19623386,19623583-19623792,19623872-196242... 79 3e-15
12_02_1195 + 26906814-26907121,26907771-26907992,26908913-269091... 58 5e-09
12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388 55 4e-08
12_02_1185 + 26786543-26786545,26786676-26786686,26787032-267872... 49 4e-06
02_01_0286 + 1921049-1921726 31 0.80
01_05_0278 - 20313373-20313387,20314617-20315240 31 0.80
02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356 30 1.4
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883... 29 2.4
08_01_0259 + 2123393-2123555,2123670-2124070 29 3.2
04_01_0122 + 1267048-1267149,1267764-1267855,1268137-1268234,126... 29 3.2
02_05_0593 - 30217432-30218232 29 3.2
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 29 3.2
11_06_0611 + 25461469-25461655,25461670-25462238 29 4.3
11_06_0196 + 21144094-21144483 28 5.6
04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814 28 5.6
04_04_0869 - 28883688-28884983 28 5.6
02_03_0182 + 16101861-16101955,16102226-16102372,16102465-161025... 28 5.6
01_06_1229 + 35551522-35552169 28 5.6
10_07_0057 + 12460986-12461036,12461108-12461161,12461420-124614... 28 7.5
10_01_0146 - 1719997-1720386,1721498-1721515 28 7.5
09_04_0514 - 18236061-18237392 28 7.5
03_02_1012 + 13207907-13207990,13209196-13209280,13209402-132101... 28 7.5
02_03_0085 + 15063444-15063889,15064324-15065311 28 7.5
02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810 28 7.5
09_04_0258 - 16175258-16176069,16176111-16176414 27 9.9
06_03_0895 - 25739515-25740498 27 9.9
05_04_0413 - 21063868-21064344,21064416-21064482,21064865-210649... 27 9.9
05_04_0284 - 19813179-19813340,19813464-19813748,19813850-198141... 27 9.9
>09_02_0577 -
10862976-10863215,10863653-10863788,10863906-10864030,
10864132-10864516,10864571-10864798,10864976-10865319
Length = 485
Score = 199 bits (485), Expect = 2e-51
Identities = 95/127 (74%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
Frame = -1
Query: 652 YLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMXG 473
Y++ P SLA + +P HAL YV+FML +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM G
Sbjct: 355 YVTAPSSLADVLANPFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPG 414
Query: 472 HRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIXVK 293
HR++++ ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE K
Sbjct: 415 HRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEK 474
Query: 292 EQA-EMG 275
E+A E+G
Sbjct: 475 ERATELG 481
>09_02_0576 -
10853361-10853600,10854033-10854168,10854285-10854409,
10854487-10854871,10854934-10855161,10855332-10855675
Length = 485
Score = 199 bits (485), Expect = 2e-51
Identities = 95/127 (74%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
Frame = -1
Query: 652 YLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMXG 473
Y++ P SLA + +P HAL YV+FML +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM G
Sbjct: 355 YVTAPSSLADVLANPFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPG 414
Query: 472 HRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIXVK 293
HR++++ ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE K
Sbjct: 415 HRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEK 474
Query: 292 EQA-EMG 275
E+A E+G
Sbjct: 475 ERATELG 481
>03_02_0140 +
5864612-5864955,5865154-5865381,5865460-5865814,
5865899-5866023,5866150-5866285,5866382-5866621
Length = 475
Score = 199 bits (485), Expect = 2e-51
Identities = 95/127 (74%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
Frame = -1
Query: 652 YLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMXG 473
Y++ P SLA + +P HAL YV+FML +CA FSKTWI+VSGSSAKDVAKQLKEQQMVM G
Sbjct: 345 YVTAPSSLADVLANPFHALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPG 404
Query: 472 HRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIXVK 293
HR++++ ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE K
Sbjct: 405 HRESNLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEK 464
Query: 292 EQA-EMG 275
E+A E+G
Sbjct: 465 ERATELG 471
>09_04_0707 + 19645471-19646112
Length = 213
Score = 122 bits (293), Expect = 3e-28
Identities = 61/124 (49%), Positives = 82/124 (66%), Gaps = 2/124 (1%)
Frame = -1
Query: 652 YLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMXG 473
Y++PP L+H A Y +L SC FS W++VS SSA+DVA+QL Q++ + G
Sbjct: 97 YVTPPAGLSHAA-------AYAASLLASCTLFSGAWVEVSRSSAQDVARQLSVQRLALHG 149
Query: 472 --HRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIX 299
RD ++ L+RYI TAAA GGLC+GAL++LAD GAIGSGTGILLA T++Y +
Sbjct: 150 ARERDAALRSHLSRYISTAAALGGLCVGALTILADMTGAIGSGTGILLAATVVYNLIDAF 209
Query: 298 VKEQ 287
KE+
Sbjct: 210 QKEE 213
>09_04_0704 +
19623046-19623386,19623583-19623792,19623872-19624223,
19624320-19624444,19624578-19624668,19624817-19625050
Length = 450
Score = 79.0 bits (186), Expect = 3e-15
Identities = 44/126 (34%), Positives = 62/126 (49%)
Frame = -1
Query: 652 YLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMXG 473
YL P LA + DP HA +YV F+L SC F S + ++E++ +
Sbjct: 337 YLRTPPILADLHRDPFHAFIYVAFVLISCVFIS-------------MGLMMQEERRLRLA 383
Query: 472 HRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIXVK 293
D+ +E+ R++ AA GG C G L + AD +G SGTGI+LAVT Y Y +
Sbjct: 384 QPDSIHANEIRRHVMRAACVGGFCAGVLIIFADLIGVFCSGTGIMLAVTASYPYVDGRAS 443
Query: 292 EQAEMG 275
E G
Sbjct: 444 EVGSFG 449
>12_02_1195 +
26906814-26907121,26907771-26907992,26908913-26909153,
26909512-26909642,26910336-26910474,26910600-26910810,
26911371-26911759
Length = 546
Score = 58.4 bits (135), Expect = 5e-09
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Frame = -1
Query: 652 YLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQL----KEQQM 485
Y++ P S I +LLY +F+L CAF S V S+K +L K+ ++
Sbjct: 295 YVTTPPSFGEIVTGDPGSLLYAVFLLTGCAFLSLFCFKVCAKSSKRYLVRLVGKPKQTRL 354
Query: 484 VMXGHR----DNSMI-HELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTII 320
+ D S+ + RY+ AA F G C+G LS+LA FLG G I+LAVT+I
Sbjct: 355 SPDDEQLPDEDESISPKQCRRYMTIAAIFVGFCVGFLSLLAGFLGL--DGPAIMLAVTVI 412
Query: 319 Y 317
+
Sbjct: 413 H 413
>12_02_1087 - 25949878-25950369,25950386-25950944,25950988-25951388
Length = 483
Score = 55.2 bits (127), Expect = 4e-08
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = -1
Query: 652 YLSPPESLAHIAHDPVHALL-YVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMX 476
Y++PP L + +H LL + +F++ SC S W + S SSA++ ++ +
Sbjct: 358 YVTPPSKLL-VDPGLIHELLIHSVFVVASCTLLSMAWAEASRSSAREFRTRVIGTGYFVW 416
Query: 475 GHRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIG-SGTGILLAVTII 320
++R I AAA GG +G L+V A +GAIG +G +L AV +I
Sbjct: 417 DETSR----RIDRVIAAAAAVGGFAVGGLAVYAGAVGAIGEAGPELLFAVLVI 465
>12_02_1185 +
26786543-26786545,26786676-26786686,26787032-26787262,
26787892-26788012,26788263-26788393,26788718-26788760,
26788963-26789220
Length = 265
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = -1
Query: 505 QLKEQQMVMXGHRDNSMIHELNRYIPTAAAF-GGLCIGALSVLADFLGAIGSGTGILLAV 329
++ +Q++ D S+ R+ T AA+ G+C+G L++LA F+G GSG I+LAV
Sbjct: 186 RVSPEQLLQEHDEDESISPRRCRHYMTMAAYIVGICVGLLNLLAGFMGLGGSGPAIMLAV 245
Query: 328 TIIYQYFE 305
T+I+ E
Sbjct: 246 TVIHNLVE 253
>02_01_0286 + 1921049-1921726
Length = 225
Score = 31.1 bits (67), Expect = 0.80
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -3
Query: 488 DGDARSPRQLHDPRTEPLHPDGGRVR---RTVHRGSVSAGRLPRGHRLRHWDTARRHHHL 318
DGD + R H G R R R RG + GR RG RL+ + R H +
Sbjct: 135 DGDGTAGR--HTGEAAEAAGGGRRHRIETRATGRGGAATGR--RGRRLKRENGGRGFHFI 190
Query: 317 PVLRDLCQGTSGDG 276
RDL G +G+G
Sbjct: 191 GEGRDLATGGAGNG 204
>01_05_0278 - 20313373-20313387,20314617-20315240
Length = 212
Score = 31.1 bits (67), Expect = 0.80
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 324 MVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAAVG 431
M + S P P P +P +S + + MH PP+ AA G
Sbjct: 1 MGASCSSPFPPPPSPAESNAPSASAMHHPPHPAAGG 36
>02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356
Length = 444
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 339 SIPVPEPMAPRKSASTDRAPMHSPP 413
++ VPEP+ PR A P+H PP
Sbjct: 79 AVLVPEPLPPRTDAPMPEIPIHPPP 103
>04_04_1596 +
34684943-34686340,34688085-34688175,34688290-34688354,
34688530-34688581,34688747-34688829,34688942-34689035,
34689468-34690051
Length = 788
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 339 SIPVPEPMAPRKSASTDRAPMHSPPNAA 422
S P+P P +PR S+S+ R+P SPP+++
Sbjct: 115 SEPLPHP-SPRVSSSSPRSPTPSPPSSS 141
>08_01_0259 + 2123393-2123555,2123670-2124070
Length = 187
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 339 SIPVPEPMAPRKSASTDRAPMHSPPNA 419
S P P PM PR T AP PP A
Sbjct: 126 SNPAPSPMTPRPRTPTAMAPNAMPPTA 152
>04_01_0122 +
1267048-1267149,1267764-1267855,1268137-1268234,
1268333-1268488,1268736-1269355,1269480-1269547,
1269848-1270099,1270390-1270525,1271054-1271246,
1271386-1271939
Length = 756
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 509 ETTEGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAG 378
+ GT D + SPR +H T GG + V R ++AG
Sbjct: 198 DVPNGTLDTEVLSPRDVHGHGTHTASTAGGNIVHNVSRLGLAAG 241
>02_05_0593 - 30217432-30218232
Length = 266
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 324 MVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAA 425
++T+ + P K STD + H PPNA A
Sbjct: 171 VITSPAAEAPSSATESKPNSTDASSKHGPPNAGA 204
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 330 TASSIPVPEPMAPRKSASTDRAPMHSPPNAAAV 428
+A +P P+P PR A D+AP+ P AAV
Sbjct: 184 SAPPLP-PQPPPPRNQAQADKAPIPVAPPGAAV 215
>11_06_0611 + 25461469-25461655,25461670-25462238
Length = 251
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 258 SSVLMPPISACSLTXISKYW*MMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAAVG 431
SS P S+ SL+ + W + S P P P A ++ RA SPP + G
Sbjct: 76 SSSQPPSTSSSSLSQLPPPWPLAPACLSPPPPLPRAETGRSAASRATAASPPVGSGGG 133
>11_06_0196 + 21144094-21144483
Length = 129
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 249 TXKSSVLMPPISACSLTXISKYW*MMVTASSIPVPEPMAPRKSASTDRAPMHSPPNAAA 425
T KS+V PP A L ++ + P P+P +P S S R+P SPP +AA
Sbjct: 69 TTKSAVAKPPAVAEPLA-VAVIKPPAAAVAKPPWPQPRSP--SPSMPRSPSLSPPVSAA 124
>04_04_1684 + 35352517-35354642,35354724-35354904,35355794-35355814
Length = 775
Score = 28.3 bits (60), Expect = 5.6
Identities = 27/81 (33%), Positives = 33/81 (40%)
Frame = -3
Query: 473 SPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLRHWDTARRHHHLPVLRDLCQ 294
SPR+ H R P +P+ R RRT R PR H H D+ H HLP D
Sbjct: 31 SPRRHH--RAPPSNPNPHRDRRTPDR--------PRRH--HHEDSLPLHVHLPPPPDALL 78
Query: 293 GTSGDGRHEHTALXSLVMIAA 231
+ D R L +AA
Sbjct: 79 TAAADRRSRADVLLEAGRLAA 99
>04_04_0869 - 28883688-28884983
Length = 431
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 339 SIPVPEPMAPRKSASTDRAPMHSPP 413
S P P P A K ++P HSPP
Sbjct: 354 SSPAPSPKAAGKKKKKGKSPSHSPP 378
>02_03_0182 +
16101861-16101955,16102226-16102372,16102465-16102515,
16102617-16102782,16103055-16103283,16104067-16104638
Length = 419
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -3
Query: 434 HPDG---GRVRRTVHRGSVSAGRLPRGHRLRHWDTARRHHHLPVLRD 303
+PDG G T+ ++ GRLP L H+ +RR H + RD
Sbjct: 188 YPDGHPFGTEFLTIAGDDLAVGRLPINDHLVHFFLSRRRHSTDMARD 234
>01_06_1229 + 35551522-35552169
Length = 215
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 461 LHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLR 351
+HDPR P+HP + T G + GR+ G R R
Sbjct: 1 MHDPRGFPIHPQPYHLHPTA--GGLGEGRMRGGGRRR 35
>10_07_0057 +
12460986-12461036,12461108-12461161,12461420-12461482,
12461666-12461716,12461996-12462057,12462156-12462318,
12462829-12462939,12463029-12463166,12463248-12463322,
12463420-12463540,12464827-12464981,12465080-12465154,
12465270-12465473,12465670-12465786
Length = 479
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 118 KYNDAFTSNTTXYENVHLMMSIQSRNDNKNGAERXGPTAAIIT 246
KY + +SN T ++ VH+MM + R K+G P+ ++ T
Sbjct: 134 KYGNELSSNLTIFDRVHMMMHLLIRG-KKDGILCPIPSHSLYT 175
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/53 (39%), Positives = 23/53 (43%)
Frame = -3
Query: 500 EGTADGDARSPRQLHDPRTEPLHPDGGRVRRTVHRGSVSAGRLPRGHRLRHWD 342
E TADG + R L R + PD G RR R S A PR R WD
Sbjct: 61 ETTADGGGAALRLL-QLRAAEMQPDDGGQRR--RRRSEPATTQPRRRASRGWD 110
>09_04_0514 - 18236061-18237392
Length = 443
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 312 YW*MMVTASSIPVPEPMAPRKSASTDRAPMH 404
+W A S+PVPEP+AP +A + H
Sbjct: 86 HWWSRAPARSLPVPEPVAPLVAAPRGGSHSH 116
>03_02_1012 + 13207907-13207990,13209196-13209280,13209402-13210186,
13210262-13210462,13210580-13210690,13211105-13211487,
13211594-13211702,13211786-13211866,13212088-13212156,
13212379-13212467,13212619-13212780,13212859-13212916,
13213143-13213373,13213516-13213662,13213779-13214333,
13214562-13214819,13215096-13215203,13215760-13215854,
13215946-13216102,13216466-13216666,13217542-13217670,
13218292-13218567
Length = 1457
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 314 LVNDGDGEQYPSAGADGPEEVGQH*QSPDAQSSERGRRR 430
L D + EQ P+ D P E ++ SPD +E + R
Sbjct: 1415 LNEDKEPEQEPTTDGDNPAEAAENNISPDDNDTEEAKDR 1453
>02_03_0085 + 15063444-15063889,15064324-15065311
Length = 477
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -3
Query: 413 RRTVHRGSVSAGRLPRGHRLRHWDTARRHHHLP 315
RR R +S+ RLP L HW RR LP
Sbjct: 22 RRLRLRAILSSSRLPTTTPLHHWPRRRRSRGLP 54
>02_01_0367 + 2639024-2640247,2641399-2641536,2641754-2641810
Length = 472
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 345 PVPEPMAPRKSASTDRAPMHSPPNA 419
P P P P+ +AS A M SPP+A
Sbjct: 288 PTPTPPRPQGTASNTTAAMPSPPSA 312
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 269 HAAHLRLFLDXDLEV-LVNDGDGEQYPSAGADGPEEVGQH*QSPDAQSSERGRRRD 433
HAA + +L++ L+ GE+ +A AD +EVG A+ + RGR+ D
Sbjct: 6 HAALWVKLYELELQLRLMRAARGEEGAAAAADDDDEVGDVASRAGAEGACRGRQYD 61
>06_03_0895 - 25739515-25740498
Length = 327
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -3
Query: 401 HRGSVSAGRLPRGHRLRHWDTARRHHHLPVLR 306
H + AG+LP H+LR D A RH L +LR
Sbjct: 49 HLHHLLAGKLPHHHKLR--DLAARHGPLMLLR 78
>05_04_0413 -
21063868-21064344,21064416-21064482,21064865-21064948,
21065028-21065158,21065504-21065560,21065818-21065866,
21067357-21067442,21067715-21067792,21067952-21068074,
21068705-21068794,21068796-21068849,21068923-21069020,
21069093-21069160,21069688-21069777,21069870-21070117
Length = 599
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 457 MIHELNRYIPTAAAFG-GLCIGALSVLADFLGAIGSGTGILLAVTI 323
+++ L++ P A F G IGA ++L +LG G GT + AV+I
Sbjct: 232 IVNYLHQKYPQAPLFAVGTSIGA-NILVKYLGEEGEGTPVAGAVSI 276
>05_04_0284 -
19813179-19813340,19813464-19813748,19813850-19814131,
19814224-19814531,19814654-19814927,19815807-19816175,
19816372-19816434,19817495-19817789,19817818-19818008,
19818123-19818428,19818516-19818638
Length = 885
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 290 FLDXDLEVLVNDGDGEQYPSAGADGP 367
+LD D+ V++ND P+A DGP
Sbjct: 252 YLDSDMIVILNDNKQVSLPTATLDGP 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,615,618
Number of Sequences: 37544
Number of extensions: 340803
Number of successful extensions: 1452
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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