Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_F21
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-10|CAB16516.1| 473|Caenorhabditis elegans Hypothetical p... 242 1e-64
Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 28 5.0
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical ... 28 5.0
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 28 5.0
Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical p... 28 6.7
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 27 8.8
U42832-4|AAA83574.4| 462|Caenorhabditis elegans Hypothetical pr... 27 8.8
U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical pr... 27 8.8
U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical pr... 27 8.8
U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical pr... 27 8.8
>Z99281-10|CAB16516.1| 473|Caenorhabditis elegans Hypothetical
protein Y57G11C.15 protein.
Length = 473
Score = 242 bits (593), Expect = 1e-64
Identities = 112/131 (85%), Positives = 121/131 (92%)
Frame = -1
Query: 652 YLSPPESLAHIAHDPVHALLYVLFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMXG 473
YLSPPESL HI DP+H ++Y++FMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVM G
Sbjct: 341 YLSPPESLGHIFEDPIHCIIYIVFMLGSCAFFSKTWIDVSGSSAKDVAKQLKEQQMVMRG 400
Query: 472 HRDNSMIHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIXVK 293
HR+ SMIHELNRYIPTAAAFGGLCIGALSV ADF+GAIGSGTGILLAVTIIYQYFEI VK
Sbjct: 401 HREKSMIHELNRYIPTAAAFGGLCIGALSVTADFMGAIGSGTGILLAVTIIYQYFEIFVK 460
Query: 292 EQAEMGGMSTL 260
EQ EMGG+S +
Sbjct: 461 EQQEMGGVSAM 471
>Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical
protein F38A6.2 protein.
Length = 891
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 14 TFMPRHAPPRTQHYAGRSAAFNSTNIKS 97
T P HAPPR+ H +S N N S
Sbjct: 102 TMSPSHAPPRSSHANSKSLYINGMNNNS 129
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 492 CSFSCFATSLAEEPDTSIQVFEKKAQEPSMXSTXSRACTGSCA 620
CSF C T L Q+F+ K E + ++ S AC CA
Sbjct: 192 CSFVC--TKLRPTLKVITQMFDSKTDETTCRTSCSSACLSVCA 232
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 507 FATSLAEEPDTSIQVFEKKAQEPSM 581
FA SL + P+T++Q+F+ ++ P +
Sbjct: 1931 FADSLRDSPNTALQMFDSSSENPEL 1955
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 507 FATSLAEEPDTSIQVFEKKAQEPSM 581
FA SL + P+T++Q+F+ ++ P +
Sbjct: 1939 FADSLRDSPNTALQMFDSSSENPEL 1963
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 333 ASSIPVPEPMAPRKSASTDRAPMHSPP 413
A+ P PEP+ P K + AP S P
Sbjct: 206 AAETPAPEPLVPEKKPKIEDAPTTSSP 232
>AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical
protein VF36H2L.1 protein.
Length = 308
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 622 IAHDPVHALLYVL---FMLGSCAFFSKTWIDVS 533
IAHDPV +L+ L F L S F S W+ +S
Sbjct: 25 IAHDPVRIILFFLGSFFWLVSLLFSSLAWLGLS 57
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 507 FATSLAEEPDTSIQVFEKKAQEPSM 581
FA SL + P+T++Q+F+ ++ P +
Sbjct: 1939 FADSLRDSPNTALQMFDSSSENPEL 1963
>Z73102-12|CAA97406.1| 430|Caenorhabditis elegans Hypothetical
protein B0035.11 protein.
Length = 430
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 500 EGTADGDAR-SPRQLHDPRTEPLHPDGG 420
E D D+R +PRQL D + +HP GG
Sbjct: 46 ESDDDDDSRPAPRQLSDSSDDNIHPRGG 73
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical protein
D2085.1 protein.
Length = 2198
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 345 PVPEPMAPRKSASTDRAPMHSPPNA 419
P+P+ M +S+S +++P+H+PP A
Sbjct: 1842 PIPQQMI--ESSSDEQSPLHTPPRA 1864
>U42832-4|AAA83574.4| 462|Caenorhabditis elegans Hypothetical
protein F01E11.5a protein.
Length = 462
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = -1
Query: 523 AKDVAKQLKEQQMVMXGHRDNSMIHELNRYIPTAAAF 413
AK A+Q+ Q+++ H +++++HE++ +PT+ F
Sbjct: 213 AKHRARQIYRQKVIRK-HIESTILHEISHVLPTSDEF 248
>U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical
protein C18B2.5b protein.
Length = 699
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 389 VSAGRLPRGHRLRHWDTARRHHHLP 315
+ G P+G+ +R + HHHLP
Sbjct: 364 IGQGAKPQGYHVRSYSHEHDHHHLP 388
>U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical
protein C18B2.5a protein.
Length = 673
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 389 VSAGRLPRGHRLRHWDTARRHHHLP 315
+ G P+G+ +R + HHHLP
Sbjct: 338 IGQGAKPQGYHVRSYSHEHDHHHLP 362
>U29380-4|AAA68738.1| 646|Caenorhabditis elegans Hypothetical
protein ZK546.5 protein.
Length = 646
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 6 IKSH-SCHXTRRHAHNTTPVGALPSTQQILNLKSNFFDKVQRCFHIQHYXI*KRTPNDVD 182
+++H + H TRR + G + + LNL N ++ Y +RT D
Sbjct: 288 LRAHVTSHHTRRKKYICKFCGHISHSMSELNLHKNDVHNYTAWANVPEYLKSRRTFYQYD 347
Query: 183 SEQKRQ*KRS 212
EQKR +R+
Sbjct: 348 EEQKRLRRRT 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,065,462
Number of Sequences: 27780
Number of extensions: 250201
Number of successful extensions: 930
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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