Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F18
         (347 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   2.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   9.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            21   9.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    21   9.9  
AF042732-1|AAC18056.1|  114|Anopheles gambiae unknown protein pr...    21   9.9  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    21   9.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    21   9.9  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 3   CDGTFNTKKQMEAHIYKEH 59
           CD ++ TK Q + H Y+ H
Sbjct: 354 CDMSYRTKLQYQKHEYEVH 372


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 159 LLQSSFNQVTHHFTIGSH 106
           LLQ   N + +HF I SH
Sbjct: 697 LLQIDSNMLINHFKIHSH 714


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 159 LLQSSFNQVTHHFTIGSH 106
           LLQ   N + +HF I SH
Sbjct: 698 LLQIDSNMLINHFKIHSH 715


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +2

Query: 242 KSTIRRHH*LRSPYITFRCRLIY 310
           K  ++ ++ +  PYI ++C L++
Sbjct: 555 KRVVKTNNSISMPYIIYQCMLMF 577


>AF042732-1|AAC18056.1|  114|Anopheles gambiae unknown protein
           protein.
          Length = 114

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = -1

Query: 149 AASTKSHITLPSAAIGVVLCNGAVXGGFRAMFFVNMGF 36
           A     H    + A+G  +    + GGFR +     GF
Sbjct: 62  ATGFSGHGIQQTPAVGRAVSEMIIDGGFRTVDLTRFGF 99


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 212 QWLQ*CHRQLKSTI 253
           QWL+ CHR L + +
Sbjct: 789 QWLRRCHRPLVNRV 802


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 319 LEAVNQTATKCNVR 278
           L AVN+T T+ N+R
Sbjct: 853 LSAVNRTDTRANIR 866


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,104
Number of Sequences: 2352
Number of extensions: 4945
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)