BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_F18
(347 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051816-1|AAK93240.1| 845|Drosophila melanogaster LD32311p pro... 33 0.099
AJ005441-1|CAA06544.2| 845|Drosophila melanogaster Kruppel homo... 33 0.099
AJ005440-1|CAA06543.2| 791|Drosophila melanogaster Kruppel homo... 33 0.099
AE014134-1049|AAG22417.1| 791|Drosophila melanogaster CG18783-P... 33 0.099
AE014134-1048|AAF52343.2| 845|Drosophila melanogaster CG18783-P... 33 0.099
AY094905-1|AAM11258.1| 323|Drosophila melanogaster RH12261p pro... 30 0.70
AE014134-1701|AAF52816.1| 323|Drosophila melanogaster CG13123-P... 30 0.70
BT024236-1|ABC86298.1| 959|Drosophila melanogaster LD10772p pro... 29 2.1
AY094804-1|AAM11157.1| 607|Drosophila melanogaster LD25464p pro... 29 2.1
AE014297-981|AAF54410.1| 607|Drosophila melanogaster CG8301-PA ... 29 2.1
AE014297-360|AAF51949.1| 959|Drosophila melanogaster CG10979-PA... 29 2.1
X63729-1|CAA45272.1| 798|Drosophila melanogaster proboscipedia ... 28 2.8
X63728-1|CAA45271.1| 798|Drosophila melanogaster proboscipedia ... 28 2.8
S94723-1|AAA08526.1| 798|Drosophila melanogaster proboscipedia ... 28 2.8
AE014297-507|AAF54089.3| 782|Drosophila melanogaster CG31481-PA... 28 2.8
AE014297-506|AAS65120.1| 777|Drosophila melanogaster CG31481-PB... 28 2.8
AE014297-505|AAS65119.1| 777|Drosophila melanogaster CG31481-PC... 28 2.8
AE014297-504|AAS65118.1| 772|Drosophila melanogaster CG31481-PD... 28 2.8
AE001572-12|AAD19802.1| 782|Drosophila melanogaster homeodomain... 28 2.8
AY094870-1|AAM11223.1| 467|Drosophila melanogaster RE36568p pro... 27 4.9
AL031581-4|CAA20891.1| 467|Drosophila melanogaster EG:115C2.6 p... 27 4.9
AE014298-73|AAF45530.1| 448|Drosophila melanogaster CG17829-PC,... 27 4.9
AE014298-72|AAN09018.1| 467|Drosophila melanogaster CG17829-PB,... 27 4.9
AE014298-71|AAF45529.1| 467|Drosophila melanogaster CG17829-PA,... 27 4.9
BT011427-1|AAR99085.1| 1253|Drosophila melanogaster SD06669p pro... 27 6.5
BT001300-1|AAN71055.1| 1253|Drosophila melanogaster AT12326p pro... 27 6.5
AE014296-1714|AAN11951.1| 1253|Drosophila melanogaster CG16711-P... 27 6.5
AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-P... 27 6.5
AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p pro... 27 8.6
AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-P... 27 8.6
>AY051816-1|AAK93240.1| 845|Drosophila melanogaster LD32311p
protein.
Length = 845
Score = 33.1 bits (72), Expect = 0.099
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAP 74
CD TF KK+MEAHI K H E P
Sbjct: 446 CDETFKNKKEMEAHI-KGHANEVP 468
>AJ005441-1|CAA06544.2| 845|Drosophila melanogaster Kruppel homolog
protein.
Length = 845
Score = 33.1 bits (72), Expect = 0.099
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAP 74
CD TF KK+MEAHI K H E P
Sbjct: 446 CDETFKNKKEMEAHI-KGHANEVP 468
>AJ005440-1|CAA06543.2| 791|Drosophila melanogaster Kruppel homolog
protein.
Length = 791
Score = 33.1 bits (72), Expect = 0.099
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAP 74
CD TF KK+MEAHI K H E P
Sbjct: 392 CDETFKNKKEMEAHI-KGHANEVP 414
>AE014134-1049|AAG22417.1| 791|Drosophila melanogaster CG18783-PA,
isoform A protein.
Length = 791
Score = 33.1 bits (72), Expect = 0.099
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAP 74
CD TF KK+MEAHI K H E P
Sbjct: 392 CDETFKNKKEMEAHI-KGHANEVP 414
>AE014134-1048|AAF52343.2| 845|Drosophila melanogaster CG18783-PB,
isoform B protein.
Length = 845
Score = 33.1 bits (72), Expect = 0.099
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAP 74
CD TF KK+MEAHI K H E P
Sbjct: 446 CDETFKNKKEMEAHI-KGHANEVP 468
>AY094905-1|AAM11258.1| 323|Drosophila melanogaster RH12261p
protein.
Length = 323
Score = 30.3 bits (65), Expect = 0.70
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAPRHRTITEY 98
C F+T + AH+ K HG + P + +Y
Sbjct: 280 CSNNFSTSSNLRAHLKKIHGVQLPAQVALLDY 311
>AE014134-1701|AAF52816.1| 323|Drosophila melanogaster CG13123-PA
protein.
Length = 323
Score = 30.3 bits (65), Expect = 0.70
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAPRHRTITEY 98
C F+T + AH+ K HG + P + +Y
Sbjct: 280 CSNNFSTSSNLRAHLKKIHGVQLPAQVALLDY 311
>BT024236-1|ABC86298.1| 959|Drosophila melanogaster LD10772p
protein.
Length = 959
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEA 71
C+ TF T K +E HI K H + A
Sbjct: 256 CNLTFQTHKTLEVHIQKHHSSSA 278
>AY094804-1|AAM11157.1| 607|Drosophila melanogaster LD25464p
protein.
Length = 607
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAP 74
C TF K + HIY++HG E P
Sbjct: 341 CGKTFIHLKTLRWHIYRQHGGEKP 364
>AE014297-981|AAF54410.1| 607|Drosophila melanogaster CG8301-PA
protein.
Length = 607
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAP 74
C TF K + HIY++HG E P
Sbjct: 341 CGKTFIHLKTLRWHIYRQHGGEKP 364
>AE014297-360|AAF51949.1| 959|Drosophila melanogaster CG10979-PA
protein.
Length = 959
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEA 71
C+ TF T K +E HI K H + A
Sbjct: 256 CNLTFQTHKTLEVHIQKHHSSSA 278
>X63729-1|CAA45272.1| 798|Drosophila melanogaster proboscipedia
protein.
Length = 798
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 11 YI*YKKTNGSPYLQRTWRGSPPXPHHYRVQH 103
Y Y TNG+PYL + HH + QH
Sbjct: 547 YYNYNDTNGTPYLNHQQQHHHHAQHHQQQQH 577
>X63728-1|CAA45271.1| 798|Drosophila melanogaster proboscipedia
protein.
Length = 798
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 11 YI*YKKTNGSPYLQRTWRGSPPXPHHYRVQH 103
Y Y TNG+PYL + HH + QH
Sbjct: 547 YYNYNDTNGTPYLNHQQQHHHHAQHHQQQQH 577
>S94723-1|AAA08526.1| 798|Drosophila melanogaster proboscipedia
protein.
Length = 798
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 11 YI*YKKTNGSPYLQRTWRGSPPXPHHYRVQH 103
Y Y TNG+PYL + HH + QH
Sbjct: 547 YYNYNDTNGTPYLNHQQQHHHHAQHHQQQQH 577
>AE014297-507|AAF54089.3| 782|Drosophila melanogaster CG31481-PA,
isoform A protein.
Length = 782
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 11 YI*YKKTNGSPYLQRTWRGSPPXPHHYRVQH 103
Y Y TNG+PYL + HH + QH
Sbjct: 547 YYNYNDTNGTPYLNHQQQHHHHAQHHQQQQH 577
>AE014297-506|AAS65120.1| 777|Drosophila melanogaster CG31481-PB,
isoform B protein.
Length = 777
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 11 YI*YKKTNGSPYLQRTWRGSPPXPHHYRVQH 103
Y Y TNG+PYL + HH + QH
Sbjct: 542 YYNYNDTNGTPYLNHQQQHHHHAQHHQQQQH 572
>AE014297-505|AAS65119.1| 777|Drosophila melanogaster CG31481-PC,
isoform C protein.
Length = 777
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 11 YI*YKKTNGSPYLQRTWRGSPPXPHHYRVQH 103
Y Y TNG+PYL + HH + QH
Sbjct: 542 YYNYNDTNGTPYLNHQQQHHHHAQHHQQQQH 572
>AE014297-504|AAS65118.1| 772|Drosophila melanogaster CG31481-PD,
isoform D protein.
Length = 772
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 11 YI*YKKTNGSPYLQRTWRGSPPXPHHYRVQH 103
Y Y TNG+PYL + HH + QH
Sbjct: 537 YYNYNDTNGTPYLNHQQQHHHHAQHHQQQQH 567
>AE001572-12|AAD19802.1| 782|Drosophila melanogaster homeodomain
protein protein.
Length = 782
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 11 YI*YKKTNGSPYLQRTWRGSPPXPHHYRVQH 103
Y Y TNG+PYL + HH + QH
Sbjct: 547 YYNYNDTNGTPYLNHQQQHHHHAQHHQQQQH 577
>AY094870-1|AAM11223.1| 467|Drosophila melanogaster RE36568p
protein.
Length = 467
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAPR-HRTIT 92
C+ F + K + AH+ K+HG P H+ T
Sbjct: 355 CERFFKSGKSLSAHLMKKHGFRLPSGHKRFT 385
>AL031581-4|CAA20891.1| 467|Drosophila melanogaster EG:115C2.6
protein.
Length = 467
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAPR-HRTIT 92
C+ F + K + AH+ K+HG P H+ T
Sbjct: 355 CERFFKSGKSLSAHLMKKHGFRLPSGHKRFT 385
>AE014298-73|AAF45530.1| 448|Drosophila melanogaster CG17829-PC,
isoform C protein.
Length = 448
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAPR-HRTIT 92
C+ F + K + AH+ K+HG P H+ T
Sbjct: 336 CERFFKSGKSLSAHLMKKHGFRLPSGHKRFT 366
>AE014298-72|AAN09018.1| 467|Drosophila melanogaster CG17829-PB,
isoform B protein.
Length = 467
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAPR-HRTIT 92
C+ F + K + AH+ K+HG P H+ T
Sbjct: 355 CERFFKSGKSLSAHLMKKHGFRLPSGHKRFT 385
>AE014298-71|AAF45529.1| 467|Drosophila melanogaster CG17829-PA,
isoform A protein.
Length = 467
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAEAPR-HRTIT 92
C+ F + K + AH+ K+HG P H+ T
Sbjct: 355 CERFFKSGKSLSAHLMKKHGFRLPSGHKRFT 385
>BT011427-1|AAR99085.1| 1253|Drosophila melanogaster SD06669p
protein.
Length = 1253
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 67 KPPXTAPLQSTTPMAADGKVMCDLVEAALQQL 162
KPP AP+ T P AD + DL L L
Sbjct: 880 KPPAVAPVAPTPPSPADSSLSTDLNATTLALL 911
>BT001300-1|AAN71055.1| 1253|Drosophila melanogaster AT12326p
protein.
Length = 1253
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 67 KPPXTAPLQSTTPMAADGKVMCDLVEAALQQL 162
KPP AP+ T P AD + DL L L
Sbjct: 880 KPPAVAPVAPTPPSPADSSLSTDLNATTLALL 911
>AE014296-1714|AAN11951.1| 1253|Drosophila melanogaster CG16711-PB,
isoform B protein.
Length = 1253
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 67 KPPXTAPLQSTTPMAADGKVMCDLVEAALQQL 162
KPP AP+ T P AD + DL L L
Sbjct: 880 KPPAVAPVAPTPPSPADSSLSTDLNATTLALL 911
>AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-PA,
isoform A protein.
Length = 1473
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 67 KPPXTAPLQSTTPMAADGKVMCDLVEAALQQL 162
KPP AP+ T P AD + DL L L
Sbjct: 880 KPPAVAPVAPTPPSPADSSLSTDLNATTLALL 911
>AY061244-1|AAL28792.1| 664|Drosophila melanogaster LD18373p
protein.
Length = 664
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAE 68
C TF TK ++ AH+ + H A+
Sbjct: 420 CSKTFRTKFELSAHVKRMHAAD 441
>AE014298-1641|AAF48061.1| 664|Drosophila melanogaster CG11696-PA
protein.
Length = 664
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 3 CDGTFNTKKQMEAHIYKEHGAE 68
C TF TK ++ AH+ + H A+
Sbjct: 420 CSKTFRTKFELSAHVKRMHAAD 441
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,594,441
Number of Sequences: 53049
Number of extensions: 211349
Number of successful extensions: 903
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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