Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F17
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.29 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       25   0.51 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   3.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 120 CAAFFWSVALCPCCFFIL-DIFSAALACD*IFWCPRAIVYC 239
           C  +F+ + L  CC FI+  +    L C   F+C   I+ C
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLC 297



 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 117 FCAAFFWSVALCPCCFFI 170
           FCA   +++ L  CC FI
Sbjct: 170 FCAFIIFTMHLLFCCAFI 187


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 353 IKEKSYTLPQLD*IYGVP 300
           I+EK YT P+L  +YG P
Sbjct: 133 IREKPYTPPRLPTVYGKP 150


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 493 LFDRFPNYY*TVKNVL 540
           L DR+ N+Y T K++L
Sbjct: 42  LLDRYDNFYQTTKSLL 57


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 493 LFDRFPNYY*TVKNVL 540
           L DR+ N+Y T K++L
Sbjct: 42  LLDRYDNFYQTTKSLL 57


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -2

Query: 245 TSAVHNGSRTPENSVTS*SCGKDVQNEET 159
           T+  HN   TP  +  S  CG+    EE+
Sbjct: 283 TTTSHNTRGTPRTTPASSRCGQLFNTEES 311


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 334 VYDFSLI---TKKLT*NNSNFDVNKETNRGQGNIPQKTSSYKLI 456
           +Y ++ I   T KLT  N  FDV K+  R   ++ ++    K++
Sbjct: 59  IYGYAAIDEETYKLTPLNEQFDVIKDNYRKVTDLKKRFPKLKVL 102


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 404 VSLLTSKFELFHVNFLVIKEKSYTLPQLD*IYGVPVFS 291
           V LLT     F VN L I  + Y   +   I+G+  F+
Sbjct: 269 VMLLTFWSAFFIVNVLYICNQCYNTVEESRIFGLVTFT 306


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,477
Number of Sequences: 336
Number of extensions: 2904
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)