Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_F17
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068524-1|AAH68524.1| 76|Homo sapiens zinc finger protein 706... 79 2e-14
BC015925-1|AAH15925.1| 76|Homo sapiens zinc finger protein 706... 79 2e-14
AF275809-1|AAG23820.1| 76|Homo sapiens PNAS-113 protein. 79 2e-14
AF275802-1|AAG23816.1| 76|Homo sapiens PNAS-106 protein. 77 7e-14
BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein. 35 0.20
BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein. 35 0.20
AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger pr... 35 0.20
AC022517-1|AAF31271.1| 819|Homo sapiens KIAA0876 protein protein. 31 2.4
AB020683-1|BAA74899.2| 1119|Homo sapiens KIAA0876 protein protein. 31 2.4
AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein. 30 5.6
X71923-1|CAA50739.1| 750|Homo sapiens tenascin-X precursor prot... 30 7.5
U89337-3|AAB47488.1| 4289|Homo sapiens tenascin X protein. 30 7.5
AL772248-1|CAI18078.1| 4222|Homo sapiens tenascin XB protein. 30 7.5
AL662884-1|CAI18332.1| 4222|Homo sapiens tenascin XB protein. 30 7.5
AL662849-16|CAI17471.1| 4222|Homo sapiens tenascin XB protein. 30 7.5
AL662828-1|CAI17414.1| 4222|Homo sapiens tenascin XB protein. 30 7.5
AL645922-1|CAI41718.1| 4222|Homo sapiens tenascin XB protein. 30 7.5
AL049547-2|CAB89296.1| 4288|Homo sapiens dJ34F7.1.1 (tenascin XB... 30 7.5
>BC068524-1|AAH68524.1| 76|Homo sapiens zinc finger protein 706
protein.
Length = 76
Score = 78.6 bits (185), Expect = 2e-14
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -3
Query: 229 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 50
MARG QKI QGH DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57
Query: 49 FENKHPKNXRPDDL 8
FE+KHPK P +L
Sbjct: 58 FESKHPKTPLPPEL 71
>BC015925-1|AAH15925.1| 76|Homo sapiens zinc finger protein 706
protein.
Length = 76
Score = 78.6 bits (185), Expect = 2e-14
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -3
Query: 229 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 50
MARG QKI QGH DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57
Query: 49 FENKHPKNXRPDDL 8
FE+KHPK P +L
Sbjct: 58 FESKHPKTPLPPEL 71
>AF275809-1|AAG23820.1| 76|Homo sapiens PNAS-113 protein.
Length = 76
Score = 78.6 bits (185), Expect = 2e-14
Identities = 38/74 (51%), Positives = 45/74 (60%)
Frame = -3
Query: 229 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 50
MARG QKI QGH DQK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1 MARGQQKIQSQQKNAKKQAGQKKKQGH---DQKAAAKAALIYTCTVCRTQMPDPKTFKQH 57
Query: 49 FENKHPKNXRPDDL 8
FE+KHPK P +L
Sbjct: 58 FESKHPKTPLPPEL 71
>AF275802-1|AAG23816.1| 76|Homo sapiens PNAS-106 protein.
Length = 76
Score = 76.6 bits (180), Expect = 7e-14
Identities = 37/74 (50%), Positives = 45/74 (60%)
Frame = -3
Query: 229 MARGHQKIXXXXXXXXXXXXXXXXQGHSATDQKKAAQKALVHVCVVCKAQMPDPKTYKQH 50
MARG QKI QGH+ QK AA+ AL++ C VC+ QMPDPKT+KQH
Sbjct: 1 MARGQQKIQSQQKKAKKQAGQKKKQGHA---QKAAAKAALIYTCTVCRTQMPDPKTFKQH 57
Query: 49 FENKHPKNXRPDDL 8
FE+KHPK P +L
Sbjct: 58 FESKHPKTPLPPEL 71
>BC107417-1|AAI07418.1| 433|Homo sapiens ZFR protein protein.
Length = 433
Score = 35.1 bits (77), Expect = 0.20
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 133 KKAAQKALVHVCVVCKAQMPDPKTYKQHFE-NKHPK 29
K+ + +H C VCK P+TYK+H E KH K
Sbjct: 322 KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKK 357
>BC030540-1|AAH30540.1| 615|Homo sapiens ZFR protein protein.
Length = 615
Score = 35.1 bits (77), Expect = 0.20
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 133 KKAAQKALVHVCVVCKAQMPDPKTYKQHFE-NKHPK 29
K+ + +H C VCK P+TYK+H E KH K
Sbjct: 322 KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKK 357
>AJ314790-1|CAC40818.1| 1057|Homo sapiens putative zinc finger
protein protein.
Length = 1057
Score = 35.1 bits (77), Expect = 0.20
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 133 KKAAQKALVHVCVVCKAQMPDPKTYKQHFE-NKHPK 29
K+ + +H C VCK P+TYK+H E KH K
Sbjct: 300 KQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKK 335
>AC022517-1|AAF31271.1| 819|Homo sapiens KIAA0876 protein protein.
Length = 819
Score = 31.5 bits (68), Expect = 2.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 48 KCCL*VLGS--GIWALQTTQTWTSAFCAAFFWSVALCPC 158
KCCL V S GI + WT + CAA W+ C C
Sbjct: 485 KCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLC 523
>AB020683-1|BAA74899.2| 1119|Homo sapiens KIAA0876 protein protein.
Length = 1119
Score = 31.5 bits (68), Expect = 2.4
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 48 KCCL*VLGS--GIWALQTTQTWTSAFCAAFFWSVALCPC 158
KCCL V S GI + WT + CAA W+ C C
Sbjct: 785 KCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLC 823
>AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein.
Length = 902
Score = 30.3 bits (65), Expect = 5.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 148 SATDQKKAAQKAL-VHVCVVCKAQMPDPKTYKQHF-ENKHPK 29
S + KA + L +H C +CK P+TY++H KH K
Sbjct: 219 SKLPRPKAGPRQLQLHYCDICKISCAGPQTYREHLGGQKHRK 260
>X71923-1|CAA50739.1| 750|Homo sapiens tenascin-X precursor
protein.
Length = 750
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -2
Query: 185 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 78
G+D EE + C P E C G C C+ G GPD
Sbjct: 678 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 716
>U89337-3|AAB47488.1| 4289|Homo sapiens tenascin X protein.
Length = 4289
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -2
Query: 185 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 78
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL772248-1|CAI18078.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -2
Query: 185 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 78
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL662884-1|CAI18332.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -2
Query: 185 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 78
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL662849-16|CAI17471.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -2
Query: 185 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 78
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL662828-1|CAI17414.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -2
Query: 185 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 78
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL645922-1|CAI41718.1| 4222|Homo sapiens tenascin XB protein.
Length = 4222
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -2
Query: 185 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 78
G+D EE + C P E C G C C+ G GPD
Sbjct: 675 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 713
>AL049547-2|CAB89296.1| 4288|Homo sapiens dJ34F7.1.1 (tenascin XB
(isoform 1)) protein.
Length = 4288
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -2
Query: 185 GKDVQNEETAGAQCHR---PEESCTKGTCPCLCGL*GPD 78
G+D EE + C P E C G C C+ G GPD
Sbjct: 674 GEDCGQEEPPASACPGGCGPRELCRAGQCVCVEGFRGPD 712
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,433,204
Number of Sequences: 237096
Number of extensions: 1628480
Number of successful extensions: 3124
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3120
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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