Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F17
         (615 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.59 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    22   4.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   5.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   5.5  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   5.5  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   5.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   5.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   5.5  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   5.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.6  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +1

Query: 319 SSCGNVYDFSLITKKLT*NNSNFDVNKETNRGQ 417
           S  G +YD   + +++  + S  D+N+E  R +
Sbjct: 463 SLAGGLYDEGTVRRRVAVDRSGIDINEEIQRNR 495


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 117 RHLSMFVWFVRPRCLTLRLTNSILRTNTL 31
           R +S +  F RP  +TL     + R NTL
Sbjct: 327 REISTYFTFTRPCGITLTFHEILKRANTL 355


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +1

Query: 121 VQLSSGRWHCAPAVSSFWTS 180
           +QL+ G W   P +   W S
Sbjct: 97  LQLTGGTWELGPMLCDSWVS 116


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 545 VNSVLNLIFFKILHCDHRPA 604
           VNS LN + + I + D+R A
Sbjct: 372 VNSALNPLIYTIFNLDYRRA 391


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 545 VNSVLNLIFFKILHCDHRPA 604
           VNS LN + + I + D+R A
Sbjct: 372 VNSALNPLIYTIFNLDYRRA 391


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 141 VALCPCCFFILDIFS 185
           +AL P CF + ++FS
Sbjct: 6   IALVPVCFLLGEVFS 20


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 141 VALCPCCFFILDIFS 185
           +AL P CF + ++FS
Sbjct: 6   IALVPVCFLLGEVFS 20


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 545 VNSVLNLIFFKILHCDHRPA 604
           VNS LN + + I + D+R A
Sbjct: 372 VNSALNPLIYTIFNLDYRRA 391


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 376 NSNFDVNKETNRGQGNIPQKTS 441
           NSN  VN+  N    NIP  TS
Sbjct: 536 NSNLTVNQTVNPVAINIPGDTS 557


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 100 CVVCKAQMPDPKTYKQHFENKHPKN 26
           C  C+       + K+HF++KH ++
Sbjct: 8   CPYCRRNFSCYYSLKRHFQDKHEQS 32


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 511 NYY*TVKNVLCSKFGFKF 564
           N Y  V   +C K+G +F
Sbjct: 44  NVYWNVPTFMCHKYGLRF 61


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,417
Number of Sequences: 438
Number of extensions: 3198
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)