Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F16
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   2.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.1  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              21   8.6  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   8.6  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   8.6  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   8.6  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 325 FGF*KIFCRCFC 290
           F F  I C+CFC
Sbjct: 71  FAFKSIICKCFC 82


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 325 FGF*KIFCRCFC 290
           F F  I C+CFC
Sbjct: 519 FAFKSIICKCFC 530


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 178 RGLSKFNIDRVNFEKNIRNY 237
           R  S+  I  +N E+N RNY
Sbjct: 49  RDSSEARIKLINEEENFRNY 68


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -3

Query: 337 SWQNFGF*KIFCRCFCSFFGNFNYL 263
           ++ N  + K++C  +   + N NY+
Sbjct: 90  NYNNNNYKKLYCNNYKKLYYNINYI 114


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -3

Query: 337 SWQNFGF*KIFCRCFCSFFGNFNYL 263
           ++ N  + K++C  +   + N NY+
Sbjct: 90  NYNNNNYKKLYCNNYKKLYYNINYI 114


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/25 (24%), Positives = 14/25 (56%)
 Frame = -3

Query: 337 SWQNFGF*KIFCRCFCSFFGNFNYL 263
           ++ N  + K++C  +   + N NY+
Sbjct: 90  NYNNNNYKKLYCNNYRKLYYNINYI 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,879
Number of Sequences: 438
Number of extensions: 2523
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)