BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_F15
(637 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY176051-1|AAO19582.1| 522|Anopheles gambiae cytochrome P450 CY... 25 2.7
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 24 3.5
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 24 4.6
AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsi... 24 4.6
>AY176051-1|AAO19582.1| 522|Anopheles gambiae cytochrome P450
CYP12F1 protein.
Length = 522
Score = 24.6 bits (51), Expect = 2.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 313 RTCMAKLICLSRDRRVIHRAFRSVEGAWLYG 221
R+C+ K + + VI R R E W YG
Sbjct: 467 RSCIGKRLAMMEMEIVIARLVRRYEVGWNYG 497
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 24.2 bits (50), Expect = 3.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 425 LKDAILNSKKDDLRSASSCLMVGRLCR 345
L D I+N + ++R +S M+G LCR
Sbjct: 271 LFDRIVNVSQANMRKFNSWQMMGALCR 297
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 352 SRPTIRQLEADRRSSFLEFNMASFKNKSDDSN 447
SRP + LE +RSSF +M + + + N
Sbjct: 229 SRPQLLLLELCKRSSFRSLSMHKRRTRKQNKN 260
>AJ000675-1|CAA04232.1| 600|Anopheles gambiae infection responsive
serine proteaselike protein protein.
Length = 600
Score = 23.8 bits (49), Expect = 4.6
Identities = 12/46 (26%), Positives = 17/46 (36%)
Frame = +1
Query: 382 DRRSSFLEFNMASFKNKSDDSNDICCNGDEDASIPFRLIGSKIPLY 519
DR N + D + C GD + FRL ++ P Y
Sbjct: 69 DRSEQLPSRNRPKLLTQCDSNRGYCVKGDACSVRTFRLRSNRCPAY 114
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,555
Number of Sequences: 2352
Number of extensions: 11712
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -