Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F14
         (483 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.1  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   2.0  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   2.6  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   4.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   4.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   4.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   4.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   6.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.9  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +2

Query: 338 FTNSSFWLRICVQTSDCESPL--IYNILYFSSIAIKV 442
           F   +FW+ +    S+ E      YNILYFS I   +
Sbjct: 308 FRALTFWIIVAPAGSNFEIGFENYYNILYFSRIMFHI 344


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 273 LFLYNLFKSKKVFPPPIK 326
           LF+Y +  ++K FP P K
Sbjct: 87  LFIYGMHHNEKYFPEPEK 104


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 183 ILFVATFVPALLPMYIKLPSSILLFINWTKLFL 281
           I FV +    L+ +YI  PS +++ I+W   +L
Sbjct: 61  IQFVRSMGYYLIQIYI--PSGLIVIISWVSFWL 91


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 298 LLKRLYKNNLVQLMKSKIDD 239
           LLKRL    ++ L+ SKI D
Sbjct: 421 LLKRLNGRGVIHLVPSKIRD 440


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 20  MLHLQIFSYSLVSCL 64
           ++HL +F Y+LVS +
Sbjct: 212 IIHLSVFVYTLVSVI 226


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 436 DGYTTKIKNVIDQWGFTVTGL 374
           D +T + K V+D  G TVT L
Sbjct: 357 DYFTIETKTVLDVLGVTVTYL 377


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 436 DGYTTKIKNVIDQWGFTVTGL 374
           D +T + K V+D  G TVT L
Sbjct: 283 DYFTIETKTVLDVLGVTVTYL 303


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 315 PPIKIALDSLIAVSGL 362
           PP+ I  D++ A+SG+
Sbjct: 119 PPMPITTDNVAAISGV 134


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 158 YWHIICCMN 184
           YW  +CC+N
Sbjct: 56  YWLNVCCLN 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,645
Number of Sequences: 336
Number of extensions: 2180
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)