Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F14
         (483 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023...    29   1.5  
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592...    29   1.5  
01_07_0113 + 41158666-41159615,41159695-41160076                       29   2.6  
07_01_1180 - 11188789-11188797,11189032-11189068,11190328-111903...    28   3.4  
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114...    27   6.0  
12_02_0688 + 22131745-22131895,22132133-22132206,22132841-221330...    27   7.9  
03_05_0431 + 24221881-24224586                                         27   7.9  

>06_03_0668 +
           23301578-23301791,23302102-23302199,23302233-23302301,
           23302674-23302961,23303045-23303208,23303344-23303599,
           23303706-23303816,23304109-23304195,23305916-23305985,
           23306093-23306149,23306309-23306426,23307314-23307403,
           23307492-23307671,23307816-23307893,23308016-23308088
          Length = 650

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -3

Query: 271 LVQLMK-SKIDDGSLIYIGSSAGTNVATKSIHTTNDMPIIYPPSFEAIGI 125
           LV LMK  K+ D +   IG   G +   K I    ++PI +P  FE++GI
Sbjct: 173 LVNLMKVEKVPDSTYDMIG---GLDQQIKEIKEVIELPIKHPELFESLGI 219


>02_01_0789 -
           5919271-5919411,5920105-5920215,5920303-5920401,
           5920486-5920642,5920774-5920937,5921017-5921079,
           5921153-5921377,5922038-5922135,5923283-5923499
          Length = 424

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -3

Query: 271 LVQLMK-SKIDDGSLIYIGSSAGTNVATKSIHTTNDMPIIYPPSFEAIGI 125
           LV LMK  K+ D +   IG   G +   K I    ++PI +P  FE++GI
Sbjct: 151 LVNLMKVEKVPDSTYDMIG---GLDQQIKEIKEVIELPIKHPELFESLGI 197


>01_07_0113 + 41158666-41159615,41159695-41160076
          Length = 443

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 217 SSAGTNVATKSIHTTNDMPIIYPPSFEAIG 128
           S+      T S +TTN   ++YP SF A+G
Sbjct: 130 STGDLTTFTMSANTTNGTDLLYPESFTAVG 159


>07_01_1180 -
           11188789-11188797,11189032-11189068,11190328-11190392,
           11190464-11190562,11190707-11190878,11190973-11191325,
           11191451-11191561,11191637-11191708,11192203-11192420,
           11192546-11192594,11192697-11192750,11192876-11192958,
           11193088-11193304,11193387-11193510,11194042-11194105,
           11194413-11194500,11194623-11194724,11194842-11194937
          Length = 670

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -3

Query: 151 PPSFEAIGIVPFNINPHYIDKVENEEHKGETRDQRIAEYLE 29
           P       I+P +++ +  D  +N+E+  E +DQ I   LE
Sbjct: 358 PTELNKTKIIPLDLSQNLYDLSQNQENNSENKDQLIMVTLE 398


>05_01_0166 +
           1145829-1145971,1146211-1146235,1147330-1147425,
           1147544-1147645,1147767-1147889,1147996-1148622,
           1148710-1148883,1148965-1149181,1149312-1149394,
           1149478-1149573,1149676-1149724,1149850-1150088,
           1150547-1150618,1150694-1150804,1150930-1151282,
           1151377-1151464,1151691-1151789,1151860-1151991,
           1152119-1152222,1153179-1153215,1153334-1153367,
           1153451-1153467
          Length = 1006

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 151 PPSFEAIGIVPFNINPHYIDKVENEEHKGETRDQRIAEYLE 29
           P       I+P +++ +  D  +N+E+  E  DQ I   LE
Sbjct: 651 PTELNKTKIIPLDLSQNLYDLSQNQENNSENEDQLIMVTLE 691


>12_02_0688 +
           22131745-22131895,22132133-22132206,22132841-22133035,
           22133124-22133171,22133573-22133587
          Length = 160

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
 Frame = -3

Query: 331 AIFIGGGNTFLLLKRLYKNNLVQL-----MKSKIDDGSLIYI 221
           A+ +GGG   +LL    ++N + +     MK KIDD  +I+I
Sbjct: 89  AVTVGGGTNGILLLPPQRHNRIPMHMDAIMKCKIDDWDIIHI 130


>03_05_0431 + 24221881-24224586
          Length = 901

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 412 NVIDQWGFTVTGLHTYPKPETAISESKAIFIG 317
           +VID WG+ +T  HT     +AIS       G
Sbjct: 141 SVIDCWGYNMTATHTVTGAVSAISAGSVFNCG 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,166,532
Number of Sequences: 37544
Number of extensions: 201838
Number of successful extensions: 521
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)