Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F14
         (483 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 su...    32   1.2  
AF429309-1|AAM43960.1|   54|Homo sapiens testis specific protein...    32   1.2  
U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent...    31   2.8  
AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channe...    31   2.8  
AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channe...    31   2.8  
AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-depende...    31   2.8  
AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-depende...    31   2.8  

>X99897-1|CAA68172.1| 2262|Homo sapiens calcium channel alpha1 subunit
            protein.
          Length = 2262

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = -3

Query: 250  KIDDGSLIYIG-SSAGTN---VATKSIHTTNDMPIIYPPSFEAIGI-VPFNINPHYIDKV 86
            K  + SLI    S   TN    A K  HTT D+P   PP      + V  N NP  + K 
Sbjct: 1139 KTPENSLIVTNPSGTQTNSAKTARKPDHTTVDIPPACPPPLNHTVVQVNKNANPDPLPKK 1198

Query: 85   ENEEHKGETRDQR 47
            E E+ + E  D R
Sbjct: 1199 EEEKKEEEEEDDR 1211


>AF429309-1|AAM43960.1|   54|Homo sapiens testis specific protein
           A14 s-type protein.
          Length = 54

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = -3

Query: 313 GNTFLLLKRLYKNNLVQLMKSKIDDGSLIYIGSS 212
           GN   L+KR+ +N   Q +KS++D G+ +Y+ SS
Sbjct: 8   GNPEYLMKRIPQNPRYQHIKSRLDTGACVYLTSS 41


>U79666-1|AAB64179.1| 2505|Homo sapiens alpha1A-voltage-dependent
            calcium channel protein.
          Length = 2505

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = -3

Query: 250  KIDDGSLIYIG-SSAGTN---VATKSIHTTNDMPIIYPPSFEAIGI-VPFNINPHYIDKV 86
            K  + SLI    S   TN    A K  HTT D+P   PP      + V  N NP  + K 
Sbjct: 1139 KTPENSLIVTNPSGTQTNSAKTARKPDHTTVDIPPACPPPLNHTVVQVNKNANPDPLPKK 1198

Query: 85   ENEEHKGETRDQR 47
            E EE K E  D R
Sbjct: 1199 E-EEKKEEEEDDR 1210


>AF004884-1|AAB61613.1| 2510|Homo sapiens neuronal calcium channel
            alpha 1A subunit isoform A-1 protein.
          Length = 2510

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = -3

Query: 250  KIDDGSLIYIG-SSAGTN---VATKSIHTTNDMPIIYPPSFEAIGI-VPFNINPHYIDKV 86
            K  + SLI    S   TN    A K  HTT D+P   PP      + V  N NP  + K 
Sbjct: 1142 KTPENSLIVTNPSGTQTNSAKTARKPDHTTVDIPPACPPPLNHTVVQVNKNANPDPLPKK 1201

Query: 85   ENEEHKGETRDQR 47
            E EE K E  D R
Sbjct: 1202 E-EEKKEEEEDDR 1213


>AF004883-1|AAB61612.1| 2266|Homo sapiens neuronal calcium channel
            alpha 1A subunit isoform 1A-2 protein.
          Length = 2266

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = -3

Query: 250  KIDDGSLIYIG-SSAGTN---VATKSIHTTNDMPIIYPPSFEAIGI-VPFNINPHYIDKV 86
            K  + SLI    S   TN    A K  HTT D+P   PP      + V  N NP  + K 
Sbjct: 1142 KTPENSLIVTNPSGTQTNSAKTARKPDHTTVDIPPACPPPLNHTVVQVNKNANPDPLPKK 1201

Query: 85   ENEEHKGETRDQR 47
            E EE K E  D R
Sbjct: 1202 E-EEKKEEEEDDR 1213


>AB035727-1|BAA94766.2| 2506|Homo sapiens alpha1A-voltage-dependent
            calcium channel protein.
          Length = 2506

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = -3

Query: 250  KIDDGSLIYIG-SSAGTN---VATKSIHTTNDMPIIYPPSFEAIGI-VPFNINPHYIDKV 86
            K  + SLI    S   TN    A K  HTT D+P   PP      + V  N NP  + K 
Sbjct: 1138 KTPENSLIVTNPSGTQTNSAKTARKPDHTTVDIPPACPPPLNHTVVQVNKNANPDPLPKK 1197

Query: 85   ENEEHKGETRDQR 47
            E EE K E  D R
Sbjct: 1198 E-EEKKEEEEDDR 1209


>AB035726-1|BAA94765.1| 2472|Homo sapiens alpha1A-voltage-dependent
            calcium channel protein.
          Length = 2472

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 28/73 (38%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = -3

Query: 250  KIDDGSLIYIG-SSAGTN---VATKSIHTTNDMPIIYPPSFEAIGI-VPFNINPHYIDKV 86
            K  + SLI    S   TN    A K  HTT D+P   PP      + V  N NP  + K 
Sbjct: 1139 KTPENSLIVTNPSGTQTNSAKTARKPDHTTVDIPPACPPPLNHTVVQVNKNANPDPLPKK 1198

Query: 85   ENEEHKGETRDQR 47
            E EE K E  D R
Sbjct: 1199 E-EEKKEEEEDDR 1210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,351,662
Number of Sequences: 237096
Number of extensions: 1165319
Number of successful extensions: 6072
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6066
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)