Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F13
         (745 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CPT8 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_UPI00006CC891 Cluster: hypothetical protein TTHERM_0028...    34   4.2  

>UniRef50_Q5CPT8 Cluster: Putative uncharacterized protein; n=1;
           Cryptosporidium parvum Iowa II|Rep: Putative
           uncharacterized protein - Cryptosporidium parvum Iowa II
          Length = 104

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -2

Query: 285 LLVYNTIPHKPFASFYTTKTYCIHYLYVISLIYTCFGKHIFTNNXTIYFC 136
           LL Y   PH    SFY +  Y I+Y   IS+ Y  F  +   +  T++FC
Sbjct: 8   LLFYFPPPHT-LLSFYFSNIYSIYYFNAISIFYFLFYFNPQNSTQTLFFC 56


>UniRef50_UPI00006CC891 Cluster: hypothetical protein
           TTHERM_00289440; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00289440 - Tetrahymena
           thermophila SB210
          Length = 577

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
 Frame = -1

Query: 508 NFYIVADKKNHINYIYKSIL-----IVQKTNTILLVTPALRSSMTNQCFVDCINLVVNNI 344
           N++ + D+++HI Y Y+  L     I+     I+LVT  +  ++     +D  N  +N  
Sbjct: 117 NYFFLLDEQSHIQYFYQEFLTFLFAIIIVQQHIILVTVKINKNLLQNSILDKFNTTLNTF 176

Query: 343 Y 341
           Y
Sbjct: 177 Y 177


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,683,496
Number of Sequences: 1657284
Number of extensions: 11374349
Number of successful extensions: 23343
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23335
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)