Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F12
         (510 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.097
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    26   0.22 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   2.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.1 bits (57), Expect = 0.097
 Identities = 11/36 (30%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +3

Query: 348 VVAVTRVDLLRSC-QSYNEDGEQNEQFREHFEQFSK 452
           ++ V R +L++ C + + E  E  + +++ +EQFSK
Sbjct: 397 ILKVIRKNLVKKCLELFEELAEDKDGYKKFYEQFSK 432


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.8 bits (54), Expect = 0.22
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 223 YFLKHLCY*FNKNILKNIMILLFISFEI 140
           Y+L H+C   +  ++ NI+ L+   FEI
Sbjct: 266 YYLSHVCQNVSTEVIGNILRLMHRRFEI 293


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 435 NVRETVHSVRRPRCSSGKT 379
           N RE+  S+ +PRC SG++
Sbjct: 85  NSRESSDSLVQPRCPSGES 103


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -3

Query: 154 ISFEILINNFRGLLSIYKTPLFLSVFFSHVNDHFVNVCKR 35
           +S+ +  N+ R L  +YK   FLS+  ++  ++FV +  R
Sbjct: 1   MSYRLSRNDIRFLKVMYKLSHFLSITPNYDFENFVIISPR 40


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 217 LKHLCY*FNKNILKNIMILLFISFEILI 134
           LKH+     KN+  N ++ +F S  I+I
Sbjct: 72  LKHIFNILMKNVTLNDVVFIFCSAPIII 99


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 254 CMERQHSHR 280
           CME QH HR
Sbjct: 156 CMEYQHLHR 164


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 254 CMERQHSHR 280
           CME QH HR
Sbjct: 156 CMEYQHLHR 164


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 254 CMERQHSHR 280
           CME QH HR
Sbjct: 156 CMEYQHLHR 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,611
Number of Sequences: 336
Number of extensions: 2050
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)