Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F09
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.0  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   4.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.2  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 139 YSILSNVHSVTDTILK*TLNTNSTELNFHYSGFILLDQLXHTNVSF 276
           + I +N H + D I   +L   +    F+ +GF  +D     +VSF
Sbjct: 327 HKIETNEHEIIDKIEMFSLQILNERAEFNAAGFFPIDYTLVFSVSF 372


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 580 TQAEDGSPVDFSQEISFHADKYEFV 506
           T  E   PV  +  ISF  ++Y+FV
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFV 396


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 580 TQAEDGSPVDFSQEISFHADKYEFV 506
           T  E   PV  +  ISF  ++Y+FV
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFV 396


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
          protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 16 CYFTSLAIYR 45
          CYFTS  IYR
Sbjct: 25 CYFTSWTIYR 34


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
          protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 16 CYFTSLAIYR 45
          CYF++ AIYR
Sbjct: 26 CYFSNWAIYR 35


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 139  YSILSNVHSVTDTILK*TLNTNSTELNFHYSGFILLD 249
            + I +N H + D I   +L   +    F+ +GF  +D
Sbjct: 1046 HKIETNEHEIIDKIEMFSLQILNERAEFNAAGFFPID 1082


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,028
Number of Sequences: 336
Number of extensions: 3409
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)