Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_F09
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051528-1|AAK92952.1|  532|Drosophila melanogaster GH18123p pro...    43   3e-04
AL024456-3|CAA19661.1|  531|Drosophila melanogaster EG:63B12.10 ...    43   3e-04
AF110234-1|AAF14250.1|  498|Drosophila melanogaster coatomer com...    43   3e-04
AE014298-266|AAF45673.1|  532|Drosophila melanogaster CG14813-PA...    43   3e-04
AY061520-1|AAL29068.1|  219|Drosophila melanogaster LD47553p pro...    29   7.6  
AE014297-3152|AAF55993.2|  219|Drosophila melanogaster CG13852-P...    29   7.6  

>AY051528-1|AAK92952.1|  532|Drosophila melanogaster GH18123p
           protein.
          Length = 532

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = -3

Query: 661 SIPXDFFPLSVTWTSDTSXALXTAVXVTQAEDGSPVDFSQEISFHADKYEFV 506
           SIP DFFPL V++ S T  A   A  V Q +  + V +S E     +KYE V
Sbjct: 481 SIPGDFFPLQVSFVSKTPYAGVVAQDVVQVDSEAAVKYSSESILFVEKYEIV 532


>AL024456-3|CAA19661.1|  531|Drosophila melanogaster EG:63B12.10
           protein.
          Length = 531

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = -3

Query: 661 SIPXDFFPLSVTWTSDTSXALXTAVXVTQAEDGSPVDFSQEISFHADKYEFV 506
           SIP DFFPL V++ S T  A   A  V Q +  + V +S E     +KYE V
Sbjct: 480 SIPGDFFPLQVSFVSKTPYAGVVAQDVVQVDSEAAVKYSSESILFVEKYEIV 531


>AF110234-1|AAF14250.1|  498|Drosophila melanogaster coatomer
           complex COPI delta-COPsubunit protein.
          Length = 498

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = -3

Query: 661 SIPXDFFPLSVTWTSDTSXALXTAVXVTQAEDGSPVDFSQEISFHADKYEFV 506
           SIP DFFPL V++ S T  A   A  V Q +  + V +S E     +KYE V
Sbjct: 447 SIPGDFFPLQVSFVSKTPYAGVVAQDVVQVDSEAAVKYSSESILFVEKYEIV 498


>AE014298-266|AAF45673.1|  532|Drosophila melanogaster CG14813-PA
           protein.
          Length = 532

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = -3

Query: 661 SIPXDFFPLSVTWTSDTSXALXTAVXVTQAEDGSPVDFSQEISFHADKYEFV 506
           SIP DFFPL V++ S T  A   A  V Q +  + V +S E     +KYE V
Sbjct: 481 SIPGDFFPLQVSFVSKTPYAGVVAQDVVQVDSEAAVKYSSESILFVEKYEIV 532


>AY061520-1|AAL29068.1|  219|Drosophila melanogaster LD47553p
           protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +1

Query: 154 NVHSVTDTILK*TLNTNSTELNFHYSGFILLDQLXHTNVSFAQSTIFFYDF 306
           N HS   TILK      +   + H++  + L +  H N SF     F  +F
Sbjct: 143 NFHSSAKTILKRLFRVYAHIYHQHFTEVVTLGEEAHLNTSFKHFIFFVQEF 193


>AE014297-3152|AAF55993.2|  219|Drosophila melanogaster CG13852-PA
           protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +1

Query: 154 NVHSVTDTILK*TLNTNSTELNFHYSGFILLDQLXHTNVSFAQSTIFFYDF 306
           N HS   TILK      +   + H++  + L +  H N SF     F  +F
Sbjct: 143 NFHSSAKTILKRLFRVYAHIYHQHFTEVVTLGEEAHLNTSFKHFIFFVQEF 193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,442,059
Number of Sequences: 53049
Number of extensions: 537095
Number of successful extensions: 1164
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1164
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)