Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_F03
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005389-1|AAH05389.1| 209|Homo sapiens geminin, DNA replicatio... 54 6e-07
BC005185-1|AAH05185.1| 209|Homo sapiens geminin, DNA replicatio... 54 6e-07
AL133264-4|CAC21511.1| 205|Homo sapiens RP3-369A17.3 protein. 54 6e-07
AK222992-1|BAD96712.1| 208|Homo sapiens geminin variant protein. 54 6e-07
AF067855-1|AAC39787.1| 209|Homo sapiens geminin protein. 54 6e-07
U76638-1|AAB38316.1| 777|Homo sapiens BRCA1-associated RING dom... 34 0.64
BC126428-1|AAI26429.1| 777|Homo sapiens BRCA1 associated RING d... 34 0.64
BC126426-1|AAI26427.1| 777|Homo sapiens BRCA1 associated RING d... 34 0.64
AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING d... 34 0.64
AF038042-1|AAB99978.1| 777|Homo sapiens BRCA1-associated RING d... 34 0.64
AC016708-1|AAX93130.1| 777|Homo sapiens unknown protein. 34 0.64
EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat ... 31 5.9
DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein. 31 5.9
BC062729-1|AAH62729.1| 258|Homo sapiens ANKRD42 protein protein. 31 5.9
>BC005389-1|AAH05389.1| 209|Homo sapiens geminin, DNA replication
inhibitor protein.
Length = 209
Score = 54.0 bits (124), Expect = 6e-07
Identities = 27/45 (60%), Positives = 29/45 (64%)
Frame = -3
Query: 617 EVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 483
E PS YWK VAEKRRKAL EAL ENE LHK + E + KK
Sbjct: 92 ENPSSQYWKEVAEKRRKALYEALKENEKLHKEIEQKDNEIARLKK 136
>BC005185-1|AAH05185.1| 209|Homo sapiens geminin, DNA replication
inhibitor protein.
Length = 209
Score = 54.0 bits (124), Expect = 6e-07
Identities = 27/45 (60%), Positives = 29/45 (64%)
Frame = -3
Query: 617 EVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 483
E PS YWK VAEKRRKAL EAL ENE LHK + E + KK
Sbjct: 92 ENPSSQYWKEVAEKRRKALYEALKENEKLHKEIEQKDNEIARLKK 136
>AL133264-4|CAC21511.1| 205|Homo sapiens RP3-369A17.3 protein.
Length = 205
Score = 54.0 bits (124), Expect = 6e-07
Identities = 27/45 (60%), Positives = 29/45 (64%)
Frame = -3
Query: 617 EVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 483
E PS YWK VAEKRRKAL EAL ENE LHK + E + KK
Sbjct: 88 ENPSSQYWKEVAEKRRKALYEALKENEKLHKEIEQKDNEIARLKK 132
>AK222992-1|BAD96712.1| 208|Homo sapiens geminin variant protein.
Length = 208
Score = 54.0 bits (124), Expect = 6e-07
Identities = 27/45 (60%), Positives = 29/45 (64%)
Frame = -3
Query: 617 EVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 483
E PS YWK VAEKRRKAL EAL ENE LHK + E + KK
Sbjct: 91 ENPSSQYWKEVAEKRRKALYEALKENEKLHKEIEQKDNEIARLKK 135
>AF067855-1|AAC39787.1| 209|Homo sapiens geminin protein.
Length = 209
Score = 54.0 bits (124), Expect = 6e-07
Identities = 27/45 (60%), Positives = 29/45 (64%)
Frame = -3
Query: 617 EVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 483
E PS YWK VAEKRRKAL EAL ENE LHK + E + KK
Sbjct: 92 ENPSSQYWKEVAEKRRKALYEALKENEKLHKEIEQKDNEIARLKK 136
>U76638-1|AAB38316.1| 777|Homo sapiens BRCA1-associated RING domain
protein protein.
Length = 777
Score = 33.9 bits (74), Expect = 0.64
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -3
Query: 746 AGRKKGSIKXYFSPRNIVTKKXNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 573
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 572 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 432
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>BC126428-1|AAI26429.1| 777|Homo sapiens BRCA1 associated RING
domain 1 protein.
Length = 777
Score = 33.9 bits (74), Expect = 0.64
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -3
Query: 746 AGRKKGSIKXYFSPRNIVTKKXNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 573
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 572 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 432
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>BC126426-1|AAI26427.1| 777|Homo sapiens BRCA1 associated RING
domain 1 protein.
Length = 777
Score = 33.9 bits (74), Expect = 0.64
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -3
Query: 746 AGRKKGSIKXYFSPRNIVTKKXNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 573
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 572 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 432
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING
domain 1 variant protein.
Length = 777
Score = 33.9 bits (74), Expect = 0.64
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -3
Query: 746 AGRKKGSIKXYFSPRNIVTKKXNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 573
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 572 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 432
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>AF038042-1|AAB99978.1| 777|Homo sapiens BRCA1-associated RING
domain protein protein.
Length = 777
Score = 33.9 bits (74), Expect = 0.64
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -3
Query: 746 AGRKKGSIKXYFSPRNIVTKKXNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 573
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 572 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 432
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>AC016708-1|AAX93130.1| 777|Homo sapiens unknown protein.
Length = 777
Score = 33.9 bits (74), Expect = 0.64
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = -3
Query: 746 AGRKKGSIKXYFSPRNIVTKKXNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 573
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 572 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 432
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat
protein transcript variant 2 protein.
Length = 782
Score = 30.7 bits (66), Expect = 5.9
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -3
Query: 638 SENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 483
+++DLCL +T ++ A K+ L L E +K L +TEE+LK KK
Sbjct: 647 AKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYKHLGGITEEDLKQKK 698
>DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein.
Length = 593
Score = 30.7 bits (66), Expect = 5.9
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -3
Query: 638 SENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 483
+++DLCL +T ++ A K+ L L E +K L +TEE+LK KK
Sbjct: 474 AKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYKHLGGITEEDLKQKK 525
>BC062729-1|AAH62729.1| 258|Homo sapiens ANKRD42 protein protein.
Length = 258
Score = 30.7 bits (66), Expect = 5.9
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -3
Query: 638 SENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 483
+++DLCL +T ++ A K+ L L E +K L +TEE+LK KK
Sbjct: 123 AKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYKHLGGITEEDLKQKK 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,263,772
Number of Sequences: 237096
Number of extensions: 1292032
Number of successful extensions: 2233
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2233
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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