Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_F03
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p... 29 3.6
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL032630-1|CAA21558.1| 366|Caenorhabditis elegans Hypothetical ... 29 3.6
AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E... 29 3.6
Z68299-7|CAJ90495.1| 269|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical pr... 29 4.7
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 29 4.7
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 29.5 bits (63), Expect = 2.7
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Frame = -3
Query: 686 KXNSSKSIQVNLDKWISENDLCLEV--PSETYWKVVAEKRRKALAEALNENEILHKSLSL 513
K + S ++ L + S+ +L +E ET W+V + L E E + + + L
Sbjct: 216 KMDPSSTMNEELTELRSQMNLIIEYNEKQETVWQVKLSEASAQLNEKDLVIEKITRKIEL 275
Query: 512 LTEENLKYKKLLDEANSFIE---VCKELMSDTAD 420
L E N+K + + E E CK L DT +
Sbjct: 276 LQENNVKKDQRIYELEQCFESEDYCKILQKDTKE 309
>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
protein Y49E10.11b protein.
Length = 1089
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = -3
Query: 668 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 489
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 622 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 680
Query: 488 KKLLDEANSFIEVCKEL 438
++ + F+ EL
Sbjct: 681 EETYQKLEQFVARAIEL 697
>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
protein Y49E10.11a protein.
Length = 1139
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = -3
Query: 668 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 489
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 622 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 680
Query: 488 KKLLDEANSFIEVCKEL 438
++ + F+ EL
Sbjct: 681 EETYQKLEQFVARAIEL 697
>AL032630-1|CAA21558.1| 366|Caenorhabditis elegans Hypothetical
protein Y62H9A.1 protein.
Length = 366
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 118 FVKQLTTRLHFYQFRPIIHFYELNLTSETLLLAHVSSCI*HSFWFIYFT 264
F L + F++F P + + N+ +L +S +SFWF YFT
Sbjct: 85 FPYHLLLTVGFFRFGPFVTAHLFNICCTLAILCSMSFL--YSFWFNYFT 131
>AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E2
ATPase protein.
Length = 815
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = -3
Query: 668 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 489
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 298 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 356
Query: 488 KKLLDEANSFIEVCKEL 438
++ + F+ EL
Sbjct: 357 EETYQKLEQFVARAIEL 373
>Z68299-7|CAJ90495.1| 269|Caenorhabditis elegans Hypothetical
protein T04B2.3b protein.
Length = 269
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -3
Query: 641 ISENDLCLEVPSETYWKVVA-EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEAN 465
+ NDL P T ++ + A+A+NEN +LH+S T E+L A
Sbjct: 33 VEHNDLSGSCPDLTAQQIQKWDDYLYETAKAVNENGVLHESTGERTSEDLSSSVYEVAAP 92
Query: 464 SFIEVCKELMSDTAD 420
+E + +S T++
Sbjct: 93 GIMETLTQTISGTSN 107
>Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical
protein T04B2.3a protein.
Length = 412
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -3
Query: 641 ISENDLCLEVPSETYWKVVA-EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEAN 465
+ NDL P T ++ + A+A+NEN +LH+S T E+L A
Sbjct: 176 VEHNDLSGSCPDLTAQQIQKWDDYLYETAKAVNENGVLHESTGERTSEDLSSSVYEVAAP 235
Query: 464 SFIEVCKELMSDTAD 420
+E + +S T++
Sbjct: 236 GIMETLTQTISGTSN 250
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = -3
Query: 569 KALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEIDDTK 390
K LAE E+++L + LL +EN++ K ++ +E S +A +T E ++ K
Sbjct: 32 KMLAEEKEEHQLLKDEVVLLRKENVEAKTYSTLLEIMLDEAEEKAS-SAQETTSEENNLK 90
Query: 389 ICN 381
I N
Sbjct: 91 ILN 93
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -3
Query: 662 QVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 483
+ L++WISE ++ E P +W+ + R L L+ + +L +LL ENL K
Sbjct: 527 KTELERWISEPNIAFEEPI-VFWQKAENRTRYPLLFQLS-SIVLCLPGALLNTENLTSAK 584
Query: 482 LL 477
L
Sbjct: 585 NL 586
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,377,218
Number of Sequences: 27780
Number of extensions: 225574
Number of successful extensions: 623
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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