Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_E18
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AL034393-13|CAA22317.1|  340|Caenorhabditis elegans Hypothetical...    27   8.6  

>Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical protein
            T16G1.9 protein.
          Length = 945

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +3

Query: 342  LIRYLEKLEEALLHFRIHSSLPRVVLKLLQYIVVYGLVLVRRQVALQEGALLGGQRVTV 518
            L+ Y   L   L   R+ + L  +V KL QY+ VYG   + R+ + +EG      RV V
Sbjct: 825  LLPYSYDLALVLEEIRLVTELMVLVSKLGQYMCVYGSQPIDRKKSFEEGLPYSPGRVGV 883


>Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical
           protein F54B8.8 protein.
          Length = 285

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +1

Query: 286 LVCLPRCEGSVVRGGYRFI*FDILRNSRKLSCIS 387
           LV +PRC GSV+ G    I F IL   ++ S IS
Sbjct: 252 LVSIPRCGGSVIEG---LISFKILTREKQASQIS 282


>AL034393-13|CAA22317.1|  340|Caenorhabditis elegans Hypothetical
           protein Y18D10A.17 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 578 HQHVGGMNGGSDYVEGGFLADGH 510
           HQH GG NGG     GG+   G+
Sbjct: 303 HQHRGGYNGGYRQNNGGYRRGGY 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,491,240
Number of Sequences: 27780
Number of extensions: 188993
Number of successful extensions: 445
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)