Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_E13
         (792 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75048-1|CAA99340.1|  445|Homo sapiens homogentisate 1,2-dioxyge...   374   e-103
U63008-1|AAB16836.1|  445|Homo sapiens homogentisate dioxygenase...   374   e-103
BC071757-1|AAH71757.1|  445|Homo sapiens homogentisate 1,2-dioxy...   374   e-103
AF045167-1|AAC02698.1|  445|Homo sapiens homogentisate 1,2-dioxy...   374   e-103
AF000573-1|AAC51650.1|  445|Homo sapiens homogentisate 1,2-dioxy...   374   e-103
BC020792-1|AAH20792.1|  329|Homo sapiens homogentisate 1,2-dioxy...   167   5e-41

>Z75048-1|CAA99340.1|  445|Homo sapiens homogentisate
           1,2-dioxygenase protein.
          Length = 445

 Score =  374 bits (921), Expect = e-103
 Identities = 164/243 (67%), Positives = 192/243 (79%), Gaps = 1/243 (0%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPG-FQIFNKYQGFLFVA 615
           RGYILEV+  HF+LPD GPIG NGLANPRDF  P+A Y D + PG + + NKYQG LF A
Sbjct: 197 RGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAA 256

Query: 614 EQNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFV 435
           +Q+ +PF+VVAWHGNY PYKY+L NFMVIN+V +DH DPSIFTVLT  S +PG+AIADFV
Sbjct: 257 KQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFV 316

Query: 434 IFPPRWSVQEHTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDDK 255
           IFPPRW V + TFRPPYYHRNCMSEFMGLI G YEAK+GGFLPGG SLHS MTPHGPD  
Sbjct: 317 IFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDAD 376

Query: 254 CFNAASNGALVPQKIAVGTQAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFSD 75
           CF  AS   L P++IA GT AFMFESSLSLA+TKWG +  + LD  Y++CW+ L  HF+ 
Sbjct: 377 CFEKASKVKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTP 436

Query: 74  KAK 66
            ++
Sbjct: 437 NSR 439


>U63008-1|AAB16836.1|  445|Homo sapiens homogentisate dioxygenase
           protein.
          Length = 445

 Score =  374 bits (921), Expect = e-103
 Identities = 164/243 (67%), Positives = 192/243 (79%), Gaps = 1/243 (0%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPG-FQIFNKYQGFLFVA 615
           RGYILEV+  HF+LPD GPIG NGLANPRDF  P+A Y D + PG + + NKYQG LF A
Sbjct: 197 RGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAA 256

Query: 614 EQNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFV 435
           +Q+ +PF+VVAWHGNY PYKY+L NFMVIN+V +DH DPSIFTVLT  S +PG+AIADFV
Sbjct: 257 KQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFV 316

Query: 434 IFPPRWSVQEHTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDDK 255
           IFPPRW V + TFRPPYYHRNCMSEFMGLI G YEAK+GGFLPGG SLHS MTPHGPD  
Sbjct: 317 IFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDAD 376

Query: 254 CFNAASNGALVPQKIAVGTQAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFSD 75
           CF  AS   L P++IA GT AFMFESSLSLA+TKWG +  + LD  Y++CW+ L  HF+ 
Sbjct: 377 CFEKASKVKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTP 436

Query: 74  KAK 66
            ++
Sbjct: 437 NSR 439


>BC071757-1|AAH71757.1|  445|Homo sapiens homogentisate
           1,2-dioxygenase (homogentisate oxidase) protein.
          Length = 445

 Score =  374 bits (921), Expect = e-103
 Identities = 164/243 (67%), Positives = 192/243 (79%), Gaps = 1/243 (0%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPG-FQIFNKYQGFLFVA 615
           RGYILEV+  HF+LPD GPIG NGLANPRDF  P+A Y D + PG + + NKYQG LF A
Sbjct: 197 RGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAA 256

Query: 614 EQNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFV 435
           +Q+ +PF+VVAWHGNY PYKY+L NFMVIN+V +DH DPSIFTVLT  S +PG+AIADFV
Sbjct: 257 KQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFV 316

Query: 434 IFPPRWSVQEHTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDDK 255
           IFPPRW V + TFRPPYYHRNCMSEFMGLI G YEAK+GGFLPGG SLHS MTPHGPD  
Sbjct: 317 IFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDAD 376

Query: 254 CFNAASNGALVPQKIAVGTQAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFSD 75
           CF  AS   L P++IA GT AFMFESSLSLA+TKWG +  + LD  Y++CW+ L  HF+ 
Sbjct: 377 CFEKASKVKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTP 436

Query: 74  KAK 66
            ++
Sbjct: 437 NSR 439


>AF045167-1|AAC02698.1|  445|Homo sapiens homogentisate
           1,2-dioxygenase protein.
          Length = 445

 Score =  374 bits (921), Expect = e-103
 Identities = 164/243 (67%), Positives = 192/243 (79%), Gaps = 1/243 (0%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPG-FQIFNKYQGFLFVA 615
           RGYILEV+  HF+LPD GPIG NGLANPRDF  P+A Y D + PG + + NKYQG LF A
Sbjct: 197 RGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAA 256

Query: 614 EQNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFV 435
           +Q+ +PF+VVAWHGNY PYKY+L NFMVIN+V +DH DPSIFTVLT  S +PG+AIADFV
Sbjct: 257 KQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFV 316

Query: 434 IFPPRWSVQEHTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDDK 255
           IFPPRW V + TFRPPYYHRNCMSEFMGLI G YEAK+GGFLPGG SLHS MTPHGPD  
Sbjct: 317 IFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDAD 376

Query: 254 CFNAASNGALVPQKIAVGTQAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFSD 75
           CF  AS   L P++IA GT AFMFESSLSLA+TKWG +  + LD  Y++CW+ L  HF+ 
Sbjct: 377 CFEKASKVKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTP 436

Query: 74  KAK 66
            ++
Sbjct: 437 NSR 439


>AF000573-1|AAC51650.1|  445|Homo sapiens homogentisate
           1,2-dioxygenase protein.
          Length = 445

 Score =  374 bits (921), Expect = e-103
 Identities = 164/243 (67%), Positives = 192/243 (79%), Gaps = 1/243 (0%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPG-FQIFNKYQGFLFVA 615
           RGYILEV+  HF+LPD GPIG NGLANPRDF  P+A Y D + PG + + NKYQG LF A
Sbjct: 197 RGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAA 256

Query: 614 EQNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFV 435
           +Q+ +PF+VVAWHGNY PYKY+L NFMVIN+V +DH DPSIFTVLT  S +PG+AIADFV
Sbjct: 257 KQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFV 316

Query: 434 IFPPRWSVQEHTFRPPYYHRNCMSEFMGLILGSYEAKEGGFLPGGASLHSMMTPHGPDDK 255
           IFPPRW V + TFRPPYYHRNCMSEFMGLI G YEAK+GGFLPGG SLHS MTPHGPD  
Sbjct: 317 IFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDAD 376

Query: 254 CFNAASNGALVPQKIAVGTQAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFSD 75
           CF  AS   L P++IA GT AFMFESSLSLA+TKWG +  + LD  Y++CW+ L  HF+ 
Sbjct: 377 CFEKASKVKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFTP 436

Query: 74  KAK 66
            ++
Sbjct: 437 NSR 439


>BC020792-1|AAH20792.1|  329|Homo sapiens homogentisate
           1,2-dioxygenase (homogentisate oxidase) protein.
          Length = 329

 Score =  167 bits (405), Expect = 5e-41
 Identities = 73/106 (68%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
 Frame = -2

Query: 791 RGYILEVFDGHFKLPDXGPIGXNGLANPRDFXTPVAHYVDEETPG-FQIFNKYQGFLFVA 615
           RGYILEV+  HF+LPD GPIG NGLANPRDF  P+A Y D + PG + + NKYQG LF A
Sbjct: 197 RGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAA 256

Query: 614 EQNHNPFDVVAWHGNYVPYKYDLNNFMVINAVLYDHCDPSIFTVLT 477
           +Q+ +PF+VVAWHGNY PYKY+L NFMVIN+V +DH DPSIFTVLT
Sbjct: 257 KQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLT 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,878,509
Number of Sequences: 237096
Number of extensions: 2861322
Number of successful extensions: 5686
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5680
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)